ghs-r (ghsr)


Basic Information

Item Value
gene id ghs-r
gene name ghsr
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 18445083 ~ 18447303 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124594.1
GAGGACATGCGGAGACAAGAGGAGCGCGCCAGCCGCCCCAAGGAGAACCTCCAGCCGCGTGAATGACCCGCTGGCAGCATGCGCTCCTGGCCCAACCGAActgactgtctctctcccgtTAACTGCAGCTGGGAggataactactggaactactactTTAACGGGAGCTACCAGGGTCCCGTGCCCCCCGAAAACCTATTCCCCATCCCCGTTCTAATGGGAATCACCATCACCTGTACTCTCCTGTTCCTAGCGGGAGTGGCCGGGAATGTAATGACTATACTGGTCGTGTCTAAATATAGAGACATGAGAACAACCACTAACCTCTACTTATGTAGCATGGCTGTCTCAGACTTGTTGATATTCCTCTGTATGCCCCCTGATGTGTATCGGTTATGGAAGTACAGGCCATGGATATTTGGAGATACATTCTGTAAGCTGTTTCAGTTCGTTAGTGAGTGCTGTACTTATTCAACGATTTTGAATATAACCGCTCTGTCCGTGGAGCGGTACCTGGCCATCTGCTTCCCACTTCGCGCCAAACGCCTGGTCACCAAGCGACGCGTCCGTGCGCTCATCCTCTTTCTCTGGCTCGTGTCGCTGTTGAGCGCGGGACCTGTCTTCGTTCTGGTGGGAGTGGAGCACGAGACTCGCCCAGCGGCGGGAAACTCTGTGACTGCTGGTGGGGCGgaaggacagacagagatagacactaGCGAGTGTAAACCCACCCAGTACGCGGTTGAGTCTGGGCTTCTAGCCGCCATGGCGTTGGTTAGCTCTGTGTTTTTCTTCCTGCCGGTGTTTTGTTTGACTGTGGTGTACAGTTTGATTGGACGAAGGTTgtggaagagacggagagagaacaATATTGGAGCTAATGTAGCACACAGGGACAAGAGCAACAGACAGACCGTCAAGATGTTAGctgtagTGGTCTTTGCCTTCGTCCTGTGCTGGCTGCCTTTCCACTTGCATCGTTACCTTATGTCCCATTCCTCCGagggctcctctcctctctggtctctcttcacCCAGTACTGCTCCCTTGTTTCCACTGTCCTCTTCTATCTCTCGGCTGCCATCAAccctgtcctctataacaccaTGTCTAGGAAGTACCGGTCAGCTGCTGCCCAACTGTTTGGTCTACAGGAGACTCAACCACCCAGAGGGAGAACAGCAAGCACTGTCAAAGGAGAGAGTTCACCTGCCTGGACAGAGTCCACTGTTAGCCTGTGACTGTAGCCAATTTGGAGGGGGAATGGGCGCTAGATATATACTTCTCTGATTTTGATATGTAGTTGTGATCAACGTCTTCTTGTGTGTTTTTCATCAGTGACCACGGCTTTCCCTGGTTGATCAAACTCAAACAGGCACCATTATGGACCATCAAGTCTTTAATCCAAGAGAGCACCGGCTTACGCATAACGTCCATGAACGTTGATTATTGATTGAAATTTGATCAGTCCGCCCTGGCCTTGCGCTGAACATATTAATTATATTAGCCTCAAGGACTTTGAACGAGACTGTTGCTTTGATGTCACAACCCGCCCGGCAAAGGCGTTTGAGAAGATGTTTtataaaatatttataaaacAAGGCGTTTCTGTCACCCAAAAAGAAGCACACCATTAGCAACAAAAACTATTAAACCGCTTTTGAAATGG
>TU1744124
TTGAGTCTGGGCTTCTAGCCGCCATGGCGTTGGTTAGCTCTGTGTTTTTCTTCCTGCCGGTGTTTTGTTTGACTGTGGTGTACAGTTTGATTGGACGAAGGTTgtggaagagacggagagagaacaATATTGGAGCTAATGTAGCACACAGGGACAAGAGCAACAGACAGACCGTCAAGATGTTAGctgtagTGGTCTTTGCCTTCGTCCTGTGCTGGCTGCCTTTCCACTTGCATCGTTACCTTATGTCCCATTCCTCCGagggctcctctcctctctggtctctcttcacCCAGTACTGCTCCCTTGTTTCCACTGTCCTCTTCTATCTCTCGGCTGCCATCAAccctgtcctctataacaccaTGTCTAGGAAGTACCGGTCAGCTGCTGCCCAACTGTTTGGTCTACAGGAGACTCAACC

Function

symbol description
ghsr Enables growth hormone secretagogue receptor activity; growth hormone-releasing hormone receptor activity; and identical protein binding activity. Involved in several processes, including actin polymerization or depolymerization; decidualization; and negative regulation of cytokine production. Located in cell surface; membrane raft; and neuron projection. Implicated in obesity.

NR:

description
growth hormone secretagogue receptor 1a variant, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124594.1 False 1670 mRNA 0.50 2 18445083 18447303
TU1744124 True 424 TUCP 0.51 2 18445587 18446561

Neighbor

gene id symbol gene type direction distance location
LOC110497068 LOC106574469 coding downstream 207190 18231889 ~ 18237893 (-)
LOC110495699 LOC106574468 coding downstream 213659 18224782 ~ 18231424 (-)
LOC110495700 LOC106594337 coding downstream 277720 18160955 ~ 18167363 (-)
LOC118941107 NA coding downstream 390729 18051980 ~ 18054354 (-)
trnal-cag-26 NA coding downstream 403584 18041417 ~ 18041499 (-)
LOC110497072 LOC106574477 coding upstream 52523 18499826 ~ 18513863 (-)
LOC118941108 LOC106575244 coding upstream 148481 18595784 ~ 18603170 (-)
LOC110495729 LOC106574585 coding upstream 157294 18604597 ~ 18617046 (-)
LOC110497079 LOC106575437 coding upstream 181788 18629091 ~ 18643487 (-)
LOC110495732 LOC106574489 coding upstream 303466 18750769 ~ 18764433 (-)
G1523160 NA non-coding downstream 126546 18318043 ~ 18318537 (-)
G1523143 NA non-coding downstream 142243 18302502 ~ 18302840 (-)
G1523137 NA non-coding downstream 147101 18296479 ~ 18297982 (-)
G1523102 NA non-coding downstream 186755 18253215 ~ 18258328 (-)
G1523122 NA non-coding downstream 192052 18252697 ~ 18253031 (-)
G1523289 NA non-coding upstream 41397 18488700 ~ 18489891 (-)
G1523230 NA non-coding upstream 105461 18552764 ~ 18554450 (-)
G1523315 NA non-coding upstream 123766 18571069 ~ 18572942 (-)
G1523291 NA non-coding upstream 128373 18575676 ~ 18579183 (-)
G1523333 NA non-coding upstream 162861 18610164 ~ 18611225 (-)
G1523149 fndc3b other downstream 9031 18432093 ~ 18436052 (-)
LOC110510546 LOC106575482 other downstream 700185 17719504 ~ 17815003 (-)
LOC118941106 LOC106575483 other downstream 742330 17685551 ~ 17702827 (-)
LOC110528763 LOC106575486 other downstream 775124 17640874 ~ 17671930 (-)
G1523234 NA other upstream 93842 18541145 ~ 18541711 (-)
G1523241 NA other upstream 114603 18561906 ~ 18567247 (-)
G1524311 NA other upstream 301822 18749125 ~ 18749395 (-)
G1524473 LOC106574589 other upstream 696682 19143985 ~ 19164126 (-)
LOC110495764 LOC106574529 other upstream 1126325 19573628 ~ 19577133 (-)

Expression


Co-expression Network