Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941111 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 19030221 ~ 19033974 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037402.1 | True | 474 | mRNA | 0.43 | 3 | 19030221 | 19033974 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941110 | LOC106574589 | coding | upstream | 19895 | 19007827 ~ 19010326 (+) |
| LOC110513694 | LOC106574589 | coding | upstream | 31108 | 18992431 ~ 18999113 (+) |
| LOC110495744 | LOC106575417 | coding | upstream | 47707 | 18978802 ~ 18982514 (+) |
| LOC110495746 | LOC106574508 | coding | upstream | 51746 | 18959384 ~ 18978475 (+) |
| keap1a | LOC106574506 | coding | upstream | 83585 | 18925186 ~ 18946636 (+) |
| LOC110495747 | LOC106574589 | coding | downstream | 2566 | 19036540 ~ 19039332 (+) |
| LOC118941064 | LOC106574589 | coding | downstream | 11094 | 19045068 ~ 19050250 (+) |
| LOC118941112 | LOC106574589 | coding | downstream | 21675 | 19055649 ~ 19064884 (+) |
| LOC110496918 | LOC106574589 | coding | downstream | 43136 | 19077110 ~ 19079615 (+) |
| LOC118941113 | NA | coding | downstream | 67880 | 19101854 ~ 19105354 (+) |
| G1523498 | NA | non-coding | upstream | 38636 | 18991315 ~ 18991585 (+) |
| G1523488 | NA | non-coding | upstream | 72850 | 18957019 ~ 18957371 (+) |
| G1523487 | NA | non-coding | upstream | 74009 | 18955909 ~ 18956212 (+) |
| G1523449 | NA | non-coding | upstream | 147800 | 18882031 ~ 18882421 (+) |
| G1523446 | NA | non-coding | upstream | 151304 | 18878257 ~ 18878917 (+) |
| G1523517 | NA | non-coding | downstream | 17592 | 19051566 ~ 19052036 (+) |
| G1523525 | NA | non-coding | downstream | 66795 | 19100769 ~ 19141665 (+) |
| G1523526 | LOC106574589 | non-coding | downstream | 67782 | 19101756 ~ 19142175 (+) |
| G1523542 | NA | non-coding | downstream | 167128 | 19201027 ~ 19202188 (+) |
| G1523570 | NA | non-coding | downstream | 201712 | 19235686 ~ 19235905 (+) |
| G1523506 | NA | other | upstream | 7826 | 19022005 ~ 19022395 (+) |
| LOC118936474 | LOC106574488 | other | upstream | 311576 | 18702289 ~ 18722091 (+) |
| LOC110495728 | LOC106574584 | other | upstream | 434621 | 18594324 ~ 18595682 (+) |
| G1522684 | NA | other | upstream | 649963 | 18379087 ~ 18380258 (+) |
| LOC118941116 | LOC106574589 | other | downstream | 141889 | 19168683 ~ 19177819 (+) |
| otomp | omp-1 | other | downstream | 172258 | 19206164 ~ 19211574 (+) |
| G1523614 | NA | other | downstream | 343093 | 19377067 ~ 19378472 (+) |
