Item | Value |
---|---|
gene id | LOC118941116 |
gene name | LOC106574589 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048582.1 |
NCBI id | CM023236.2 |
chromosome length | 74657750 |
location | 19168683 ~ 19177819 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
inner centromere protein-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036952179.1 | False | 3598 | mRNA | 0.47 | 5 | 19168683 | 19177819 |
XM_036952180.1 | False | 4001 | mRNA | 0.46 | 4 | 19169449 | 19177819 |
XM_036952181.1 | False | 3486 | mRNA | 0.47 | 4 | 19171080 | 19177819 |
TU1744438 | True | 763 | TUCP | 0.48 | 2 | 19175863 | 19176962 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118941115 | LOC106574589 | coding | upstream | 5612 | 19153954 ~ 19163071 (+) |
LOC118941114 | LOC106574589 | coding | upstream | 20116 | 19139399 ~ 19148567 (+) |
LOC118941066 | LOC106574589 | coding | upstream | 35010 | 19128009 ~ 19133673 (+) |
LOC118941065 | LOC106574589 | coding | upstream | 49921 | 19113019 ~ 19118762 (+) |
LOC118941113 | NA | coding | upstream | 63329 | 19101854 ~ 19105354 (+) |
LOC118936408 | LOC106575380 | coding | downstream | 4599 | 19182418 ~ 19184256 (+) |
LOC110497082 | LOC106575380 | coding | downstream | 6476 | 19184295 ~ 19186194 (+) |
LOC118941045 | NA | coding | downstream | 25717 | 19203536 ~ 19205195 (+) |
otomp | omp-1 | coding | downstream | 28345 | 19206164 ~ 19211574 (+) |
LOC110495749 | LOC106575379 | coding | downstream | 85347 | 19263166 ~ 19286263 (+) |
G1523526 | LOC106574589 | non-coding | upstream | 26508 | 19101756 ~ 19142175 (+) |
G1523525 | NA | non-coding | upstream | 27018 | 19100769 ~ 19141665 (+) |
G1523517 | NA | non-coding | upstream | 116647 | 19051566 ~ 19052036 (+) |
G1523498 | NA | non-coding | upstream | 177098 | 18991315 ~ 18991585 (+) |
G1523488 | NA | non-coding | upstream | 211312 | 18957019 ~ 18957371 (+) |
G1523542 | NA | non-coding | downstream | 23283 | 19201027 ~ 19202188 (+) |
G1523570 | NA | non-coding | downstream | 57867 | 19235686 ~ 19235905 (+) |
G1523571 | NA | non-coding | downstream | 59235 | 19237054 ~ 19265291 (+) |
G1523575 | NA | non-coding | downstream | 73116 | 19250935 ~ 19255872 (+) |
G1523590 | NA | non-coding | downstream | 109578 | 19287397 ~ 19287613 (+) |
G1523506 | NA | other | upstream | 146288 | 19022005 ~ 19022395 (+) |
LOC110495746 | LOC106574508 | other | upstream | 194679 | 18959384 ~ 18978475 (+) |
LOC118936474 | LOC106574488 | other | upstream | 450038 | 18702289 ~ 18722091 (+) |
LOC110495728 | LOC106574584 | other | upstream | 573083 | 18594324 ~ 18595682 (+) |
G1523614 | NA | other | downstream | 199248 | 19377067 ~ 19378472 (+) |
LOC110495755 | LOC106574522 | other | downstream | 264226 | 19436699 ~ 19444433 (+) |
G1523703 | LOC106575364 | other | downstream | 328573 | 19506392 ~ 19507256 (+) |