LOC118941045


Basic Information

Item Value
gene id LOC118941045
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19203536 ~ 19205195 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037327.1
ggagggtgttctgtctgtctggggaatggactcaggaggagagtggagggtgttctgtctgtctggggaatgGACTCAGAAGGAGAGTGgagggtgttctgtctgtctggggaatgGACtcaagaggagagtggagggtgttctgtctgtctggggaatgGACtcaagaggagagtggagggtgttctgtctgtctggggaatgGACTCatgaggagagtggagggggcagagagaatGACATCACTCAACGGACAGGGGAACAGAATATGACGGACCGAAGGTGGCCTTCTATGCGGCTTTGACTGATTCAGGAGCAGTAGGACCCTTCAGTTCTGAAACCAATCTGATCTACATCAAAGTCTTCACCAATATAGGCAATGCCTTACCGCCAACATACAGGTGCCTTCACAGCACCGGGGAGAGGAGTCTACTACTTCAGCTACACTGCCTCTGATCATCGAAATAactttttttaattacattttttcagtcggataaacactccaaacagcctacccgaccgctctGAGGCgcccgcatggtcct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037327.1 True 548 mRNA 0.51 3 19203536 19205195
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110497082 LOC106575380 coding upstream 17342 19184295 ~ 19186194 (+)
LOC118936408 LOC106575380 coding upstream 19280 19182418 ~ 19184256 (+)
LOC118941116 LOC106574589 coding upstream 25717 19168683 ~ 19177819 (+)
LOC118941115 LOC106574589 coding upstream 40465 19153954 ~ 19163071 (+)
LOC118941114 LOC106574589 coding upstream 54969 19139399 ~ 19148567 (+)
otomp omp-1 coding downstream 969 19206164 ~ 19211574 (+)
LOC110495749 LOC106575379 coding downstream 57971 19263166 ~ 19286263 (+)
LOC110495750 LOC106574515 coding downstream 90324 19295519 ~ 19321171 (+)
LOC110495753 LOC106574519 coding downstream 202449 19407644 ~ 19414042 (+)
LOC110495754 ola1 coding downstream 219054 19424249 ~ 19434856 (+)
G1523542 NA non-coding upstream 1348 19201027 ~ 19202188 (+)
G1523526 LOC106574589 non-coding upstream 61361 19101756 ~ 19142175 (+)
G1523525 NA non-coding upstream 61871 19100769 ~ 19141665 (+)
G1523517 NA non-coding upstream 151500 19051566 ~ 19052036 (+)
G1523498 NA non-coding upstream 211951 18991315 ~ 18991585 (+)
G1523570 NA non-coding downstream 30491 19235686 ~ 19235905 (+)
G1523571 NA non-coding downstream 31859 19237054 ~ 19265291 (+)
G1523575 NA non-coding downstream 45740 19250935 ~ 19255872 (+)
G1523590 NA non-coding downstream 82202 19287397 ~ 19287613 (+)
G1523591 NA non-coding downstream 83285 19288480 ~ 19288702 (+)
G1523506 NA other upstream 181141 19022005 ~ 19022395 (+)
LOC110495746 LOC106574508 other upstream 229532 18959384 ~ 18978475 (+)
G1523614 NA other downstream 171872 19377067 ~ 19378472 (+)
LOC110495755 LOC106574522 other downstream 236850 19436699 ~ 19444433 (+)
G1523703 LOC106575364 other downstream 301197 19506392 ~ 19507256 (+)
LOC110495769 LOC106575326 other downstream 545537 19748427 ~ 19761242 (+)

Expression

LOC118941045 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
End of interactive chart.

LOC118941045 Expression in each Bioproject

Bar chart with 15 bars.
LOC118941045 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
End of interactive chart.

Co-expression Network