Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941117 |
| gene name | LOC106574523 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 19458772 ~ 19460921 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106574523 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036952189.1 | False | 1568 | mRNA | 0.52 | 2 | 19458772 | 19460419 |
| XR_005037405.1 | True | 1367 | mRNA | 0.55 | 3 | 19458772 | 19460921 |
19,454,800
19,455,200
19,455,600
19,456,000
19,456,400
19,456,800
19,457,200
19,457,600
19,458,000
19,458,400
19,458,800
19,458,800
19,459,200
19,459,600
19,460,000
19,460,400
19,460,800
19,461,200
19,461,600
19,462,000
19,462,400
19,462,800
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495755 | LOC106574522 | coding | upstream | 14339 | 19436699 ~ 19444433 (+) |
| LOC110495754 | ola1 | coding | upstream | 23916 | 19424249 ~ 19434856 (+) |
| LOC110495753 | LOC106574519 | coding | upstream | 44730 | 19407644 ~ 19414042 (+) |
| LOC110495750 | LOC106574515 | coding | upstream | 137601 | 19295519 ~ 19321171 (+) |
| LOC110495749 | LOC106575379 | coding | upstream | 172509 | 19263166 ~ 19286263 (+) |
| LOC110495758 | LOC106575368 | coding | downstream | 1928 | 19462849 ~ 19470686 (+) |
| zgc:112416 | cssa16h21orf58 | coding | downstream | 83223 | 19544144 ~ 19546580 (+) |
| LOC110495766 | LOC106574532 | coding | downstream | 194295 | 19655216 ~ 19669147 (+) |
| trnak-uuu-124 | NA | coding | downstream | 211253 | 19672174 ~ 19672246 (+) |
| trnak-uuu-125 | NA | coding | downstream | 212383 | 19673304 ~ 19673376 (+) |
| G1523637 | NA | non-coding | upstream | 34613 | 19384228 ~ 19424159 (+) |
| G1523624 | NA | non-coding | upstream | 97241 | 19359388 ~ 19361531 (+) |
| G1523601 | LOC106574516 | non-coding | upstream | 131496 | 19324064 ~ 19327276 (+) |
| G1523594 | NA | non-coding | upstream | 167260 | 19291222 ~ 19291512 (+) |
| G1523592 | NA | non-coding | upstream | 169454 | 19289066 ~ 19289318 (+) |
| G1523726 | LOC106574571 | non-coding | downstream | 69331 | 19530252 ~ 19530651 (+) |
| G1523728 | NA | non-coding | downstream | 70994 | 19531915 ~ 19533004 (+) |
| G1523734 | NA | non-coding | downstream | 85676 | 19546597 ~ 19547960 (+) |
| G1523735 | LOC106574527 | non-coding | downstream | 87475 | 19548396 ~ 19548778 (+) |
| G1523753 | LOC106574529 | non-coding | downstream | 113277 | 19574198 ~ 19577096 (+) |
| G1523614 | NA | other | upstream | 80300 | 19377067 ~ 19378472 (+) |
| otomp | omp-1 | other | upstream | 251538 | 19206164 ~ 19211574 (+) |
| G1523542 | NA | other | upstream | 256683 | 19201027 ~ 19202188 (+) |
| LOC118941116 | LOC106574589 | other | upstream | 281810 | 19168683 ~ 19177819 (+) |
| G1523703 | LOC106575364 | other | downstream | 45471 | 19506392 ~ 19507256 (+) |
| LOC110495769 | LOC106575326 | other | downstream | 289811 | 19748427 ~ 19761242 (+) |
| G1523847 | NA | other | downstream | 314171 | 19775092 ~ 19827966 (+) |
| LOC110495771 | LOC106574539 | other | downstream | 436139 | 19897030 ~ 19900020 (+) |
| LOC110495777 | LOC106574545 | other | downstream | 531919 | 19992559 ~ 20049054 (+) |
