LOC110495765


Basic Information

Item Value
gene id LOC110495765
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19578492 ~ 19581234 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002469470.2
aattgtCTCTGCAATGTCAAAtccaataaatgttttatttttttcaatttcaatttattttAAAAGAAATGGGGAATAATTTAGTGCAAGGGTGACAATATATTTGGCTTcaactgtgtagtgtgtgtgtgtgtgtgtgttcgctttGTCGTGGTCTAGTGTGAAATTATTCACACACTCAAACGCACTGACCTACACCATGGACTGACCTCCAGGTACATGCAGAAGTACTTATCTGCCCTaacgtgtgtgtggtgtgtcaggTCTACAAGGTTCGATGCCAAGATGGAGAGGCGGACAAATAAGATGAAGGGAAAACAGGAAGAGAGGTAAAACGTCATCGTGGCACACCAACATCTGTGTATTTCTCTATATATGTGAAGCAATTTGCAACTAAAGAATGTGTTTTGTAATCTATGTATCTGTATTTACATGGCTGTTACCCAGTCAGGCCCTGTGTGTGTATTCAGCTGGCCTACTACAAATCCCACAGGGAGATATGGTAAACGTTACCCAGTCAGGCCCTGTGTGTGTATTCAGCTGGCCTACTACAAATCCCACAGGGAGATATGGTAAACATTACCCAgtcaggccctgtgtgtgtgtattcagctGGCCTACTACAAATCCCACAGGGAGATATGGTAAACGTTACCCAgtcaggccctgtgtgtgtgtattcagctGGCCTACTACAAATCCCACAGGGAGATATGGTAAACGTTACCCAgtcaggccctgtgtgtgtgtattcagctGGCCTACTACAAATCCCACAGGGAGATATGGTAAACGTTACCCAgtcaggccctgtgtgtgtgtattcagctGGCCTACTACAAATCCCACAGGGAGATATGGTAAACGTTACCCAgtcaggccctgtgtgtgtgtattcagctGGCCTACTACAAATCCCACAGGGAGATATGGTAAACGTTACCCAGTCAGGCCCTGTGTGTGCTGTATTTGACTTTAGTGTGTCTCTGACGATGTGACTGCGATCAGAACAATGCTCCAAGTTTATTTTGTTAGTTTCATGGAACAAACCTTTACATACGTCACAGCTAAGCTAACCGCCCAAACCGGCTTGTGCTCTATGACTTCTTACCAACCTGGCTGGTCTGAAAGGTTGTGCAGTCCTCTCAAAATATGAAGTGTGTGTCTAACCAGCTGGTTGTCTTTGTGTTAACAGAAAGGCAGAGATGATGAGGCATGAAGAAATCAGAACGAAATATGGTCTCAGTGGGTTCAACCCGTACTCCAAATTCTCTTGAGCTGATATTTGAACACTGTACTATCAACTGCCTGCCTTCTCTTCACCTTCGACCTTTCACCTTCGACCCCCCCCAAGGACTGTTAACCTTATTGTCTGTTCTATGCTCAGCTTACCCTCCCTTAAACCAAAAGTAGAGGTGTTTGTATCATTTCAGACCGTAGTTTTGAATGTAGCGCTCACAAGCCAAAACGGGTCGCCAAATAATGTGCACAACGTCACTTATTTCGTAATATGTTACGtcctgcaaaaaaaaataaaaaatcctgcAATTCGTAtgatgttacgaattccaattcgtacaatatgttacgaatgtGTAAGTGCTTAAGATCCCGTTCAATCTCTTTAACCGTTTGAGGAGAATACATGAAACTGGCCTTAGATCAAAGTTTTGGTACAACCTGTTTATACAACATTATCTGCCCATGTAACACAGGTCATTAAACATTGTGTTGAATGTAATGAACAAAGTATTCTACGAATGCTTAGCTAGAACAAGTTCTGCGCTGCTTGGTGAGTGGTGCAGTGCTGAACATGTCTTGCAGTGCAGACTGTGAGAGCAGTGGAAAGGTGCAGTAGCCTTAGCAACTTACCTTATTTATACCATCTTCCTTCTGTgactactactgtattataaaCTCATGCTGGTATTTGAGGGTTACTACTTGGTTATAGGAGATCTTGCCTATGCTCTACTTGATTGAGAAGATGCACTCCAGAAAAGTTGACCTTTTCTATGTACATTCATCTTATGGTGATCTATTGTTAATGTGTCCAGTGCACACCTGTACTCCATCAAACAATAAACTTGTATAGATGTATTGTCCTAATTTAAACCAGAATTGTACTTAatgatgcactatgcagaaatccctctgccatttcctgcttgcaaaaattctaatagttcacctaatttcagtttgtgacaaaacaagcgaCTATAgtttagagaatcattgtaccatctaaacagcTGTGGAATATGTTTTCCTTACGCTAAGCATAGAAATATTGCACATACAACAGGTCtgccgcttcttagacttgctttcatttctatgtgaatttggtctggttgcccaaaaagttacatattgcagctttaaatagGAGGGTGTTCAGAAGAGTTGAATTCTCAaaattgcagatagaaatgtaccCTACCATATAGAATGTACACACCTTGTACAATGAGACAAAGAATGTCAGATCTAAGTAATAGATTTCTACCTGTGACAGCTTTCTCATTACAGACACCAGCTACTTCCGTTAGAATCTTGTCAGGCCAAATTAAGCCATTTTTTTATTGATGTCAAGTTGTGTAATAAACTACCCTTTGTCTGTTGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106568286

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002469470.2 True 2629 mRNA 0.41 2 19578492 19581234

Neighbor

gene id symbol gene type direction distance location
LOC110495764 LOC106574529 coding downstream 1359 19573628 ~ 19577133 (-)
LOC110497085 LOC106574572 coding downstream 7797 19562014 ~ 19570695 (-)
LOC110495763 LOC106574527 coding downstream 17269 19546585 ~ 19561223 (-)
LOC110497083 LOC106574571 coding downstream 38514 19503499 ~ 19539978 (-)
LOC110495762 LOC106574525 coding downstream 76439 19495326 ~ 19502053 (-)
LOC110497086 LOC106574531 coding upstream 3600 19584834 ~ 19648751 (-)
trnan-guu-14 NA coding upstream 95425 19676659 ~ 19676732 (-)
LOC110495768 LOC106574536 coding upstream 181240 19762474 ~ 19793454 (-)
LOC118941046 LOC103370040 coding upstream 278970 19860204 ~ 19864234 (-)
LOC110495773 casq1 coding upstream 378246 19959480 ~ 19967828 (-)
G1524679 NA non-coding downstream 5963 19570743 ~ 19572529 (-)
G1524598 NA non-coding downstream 180690 19397331 ~ 19397802 (-)
LOC110495751 LOC106574518 non-coding downstream 200386 19322656 ~ 19384501 (-)
G1524548 NA non-coding downstream 256456 19321833 ~ 19322036 (-)
G1524545 LOC106574515 non-coding downstream 261986 19315112 ~ 19316506 (-)
G1524702 NA non-coding upstream 85876 19667110 ~ 19669050 (-)
G1524746 NA non-coding upstream 126450 19707684 ~ 19708154 (-)
G1524769 NA non-coding upstream 161555 19742789 ~ 19745279 (-)
G1524791 NA non-coding upstream 267135 19848369 ~ 19848839 (-)
G1524820 NA non-coding upstream 269840 19851074 ~ 19851287 (-)
G1524473 LOC106574589 other downstream 414366 19143985 ~ 19164126 (-)
G1524311 NA other downstream 829097 18749125 ~ 18749395 (-)
G1523241 NA other downstream 1011245 18561906 ~ 18567247 (-)
G1523234 NA other downstream 1036781 18541145 ~ 18541711 (-)
G1524755 LOC106581475 other upstream 141511 19722745 ~ 19730068 (-)
LOC110497093 LOC106574562 other upstream 989862 20558557 ~ 20595753 (-)
G1527230 NA other upstream 2680822 22262056 ~ 22262462 (-)
G1528018 NA other upstream 3290811 22872045 ~ 22885833 (-)
LOC110495841 LOC106574435 other upstream 3578324 23008547 ~ 23168591 (-)

Expression


Co-expression Network