LOC118941046 (LOC103370040)


Basic Information

Item Value
gene id LOC118941046
gene name LOC103370040
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19860204 ~ 19864234 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951384.1
CAAGCTGAAGATTAAAACATACCAGACCAACAAAAAGATTCTCCAACTTTTCCTCCATGATGATAATGAGTTCTCACTCCGAGAGAAAAGCCTCCTTCCCTGGTCTCTCAGTCCTGATGTCACCCACCGCCCTGTCACCCACCTCCCCCATACAGCGAGACCTAAACTCCCCCAGGGGGTCCATCTTCGCACCCCTATCCCTTACCGATCCACCCAGCTGGGTGATGCTGGCCCTCTGCAATGTAGAGCAGGGCGAGAAAGAGCTGCAGAGCCTTAGAAAACGACAGACGAGTGAGGTGGAGGAAATGAACCGAGAGCTTGACAACGCCATCATTGAGGCTCAGAGACAAGAGCGCCGACTGCTGGAAAAAGTTGAGCAGGACCACCGAGAAGCCCAGCGGCACCTGGAGCAGGTGAAGAGGGAGAACGCTGCGGCAGTGCGGGTTGGACAGTCCCTGGTGGACCGGCAGCTCCGCAAACTGGGCCAACTGAAGGAGCAGGTCCAGAGATGGGGTGGAAGCAGTGGGGGACCCAATAAGAACCAGCTTCAGAGGGGTGTGGCAGAAGTTACACAGCCTTGGGAAATCTCCCTCTCCTTAAAGAGGGTCACTTTTCAGCCCGGTACGCAGCTGAAGGACGTTAGGTTAGGGGAGGTACAAGTCCAGGATCAAAATCTGAACTACCCTATTGGTGTCTGCGGTGAAACAGGGAAGAAATGTGCTCTTCACTCAGGGGAGATGAAGTTTGGAGACCGTGGATCATTTGAAGTTCGGAAGGACCTTTCATCCACATCAAATAGTGGGAGCATGCGTGTAGTCAGGAAGCTCCGCCTGTCCACCACAGACAAGGATGAGCCAAAGTCACCAGTCTCAAAGCCACCGCTCAGTCCCCGGCATCGAGGAGCATCTGAGTCATCCATGGATGAGGAGCTAGACACACATGGCCAGGACCTTTTCCTGGCTATCCCTCCAATCTCCAGCCAAGGGGAGTCGGAGGTAGAcgaaccagaatgtggacaaaCTGGAATCAAGAAAAGCTCCATCCTCAAGTGTCAGAGAAAGCAAAGGACCCTGGTTCTCATCCCCAGCGAGGAACCCTCCTGCCCTCCAGAAGGCGTCAGATCTGAACATAGTGACCAACCACAGACCTCTCCCAAGACCAGCCGTGGAGAACCCCATCCCAGGTACAGCCTCCTGGACCTATCTTCAAGATGCGCACGCTCACGTCAAAGCCTGTCACCCAGCAAATCCCCCCGTGGAACATCCACTAATGGGGGGAGTCCCCCATCCCCGGCTGGCAGTGAGGACTGCTACAACTACATCACCATCCCCTCTCCTAGTAACAATGTCTCCCTGAACCAGGAACACCGACGCGCCATGTCGATGGCGGACCTCTCCAGGAAGACCCGTCCTTTGATCAATGGGGGAAAGGGTGCTCACCTGGGATTTAAGAGAGACAACCACTCCTGTCTATCATCTGCCTCCTCAACCCTGGAGCAAGGGAATGGATCTGAGTCTGGCGGCAGAAGCCCCACAAGCTCGGATGAAAGAGAATCAAGATACCAGGGAAGGAGTGTAGGTTCTAACTGTGTGAGTCGATCTCTGTCCATGTCGGCTATTGACAACGAAAGCCACCCTACAGCCAAGGAGAAACAATCAGACAATAGAAGGAGAGACAAACCAGAGCCAATCCTGAGAGACCTGGAGGAGGAAGCAGGTTCAAGTGCCTTTGAGTCAGCAAATCTGATCAAGCAGTTTGGAAAGCAGGGCTCAGGGCGCTCCGACTTCAACCTGCCCAGCGGGCTCCACGCCACTGTCAAAGGGCAGCTTTTTGTGGTGGACTGTGGAAACGCCCGAATTCAGGTGACCGACCTTCAGAAGTATGTTGTGCAGCAGGTGTCCCCTACTGGAACTGAGAGATCTGCCCGCATCTGCAACTACTTTGATGTGGCTGTGAACAACAAGGGCCTCATTGCGCTGACCTGTGCTGCAGAGCGTGCCGTGTTGGTGTTCAGCCGTCATGGACGCCTCCTCCAGACCTTCGGGGGTAACATGATAGGATCCACCCATGAAGAGCTAGATGCACCAAGGGGAGTGACCGTCACCCGTCTGGATGAGTTCCTGGTGGCCGACATCAAGCGTGGAACTCTAACTGCCCTGATGCTGGACCCCAAGACAGGCGCCAGGCTGGAGCGCACCATAATCACAGGATTCCACAGGCCCTACCTGGTGGCTGCCTGCCTGACCTCTGGGCTGATGGCTGTGTCTGAGCGGGGCAATGAGACTGGCTGTGCGCCTTGCATCCGAGTGCTGGAACCTGGCTGGAACACCATCCGTGTCCTGGGGTTGTGCTCCGGCATGGGGCCTGTCCTGGCCTGCCCCTGGGGCCTCAGCATCGATAGTGATGGGGATGTCTTGGTGGCAGACTGGGGCAGGTTGCACCGCGTCCTGCTGTACCCTGCCAAGGGCCTAGGCTGGCCCCTTGTTACCCAGGGTCTGAGCAGCCCCCGAGGCCTGGCCCTGCTGCCAGAGGGCCAGTTAGTGGTGTCAGACAGCATGAACCACTGTATTAAGATCTACCAATACAAGTGAGACACTGGCGGGGTGAAGCTGTCAAGATGAGGGTGGAAAGATGAAGATGGTGAAGAAGTAGGCATTCTCTAGTCAACACCGATGCAGATTTCAGTAAATAACAACTACTTTGGCATAATCCTAGAGGATCCTGTTGAGAAGTTCATGTTCTTCTAGAAAAAAAGTGAATCATAAGTCACAATGTAGGGTACAAATTGCAAAAGAAGACAGACTGTATAGAGTTGTGGAGAACAGTAGAGAAGATTACATCTTTATTACCGCAGAGGACAATTTCATTTGCAGCAAACGTTTTAGCTTGTTTTTAATTTGCCCATTGTCTTAAATGTGATAATCATAGTTTGATAATGAACCAAATGAAAATGGTGAAGAATAGCTGTATATAGCAAAAATATATTTAGCAGAAGCATAGTTGTATTTTAATAGCTACTACAGTGTAGAGCAGCAGTGAATTATTTACACCATATAACACAAAATTAAGGGTCCGTGCTGTCCGGAacccttgggacatccctaccccaTAAATGTTTAAGGTAACgattaaggtcagggttaggtaagggttatggttaaggttaaggttaggtctaGGGTAAGGGTAGAGGTTAAGGAtaagcttagggttagggtttagagtAGGGATGTCCCAAGAATCCCGGATAGCACTGATCCAAAACTAAGGGTGGAACTTTGTATCTGTTATTAGACTTCTAGGTATTTCAATGAAAATTCAAGAGACATTTTAAATGGCTTGCTGTTGTTATGAGTAGTTGATTACTCACAAAATAAACTAACTGTTCGCAAAATTGGCCATTTTATATAATGTGTAACAACAGGGTATGTGATGTTGCTGTAATTTCACCTCtgcccttacaaaaaaagattgccgttttgaaactgcagtaaagtGCAGTAACTGCCGTCGGTTGTGAtattttggacgcagtaattGCAAGATTACTGCAGTAAAAAGAAAATTGTATTTTGGAcacagtatttgcagcatactggggttatactgcactctaacgaCATTTATactacagtgtactgcagttactGTACACTGCAGTCTGACTGCACATTTGTTTCATAAGGTTGAAGTCTGAAAGCTTTTGAAATGCTGTCTATCCCCAGTAGTTATGTTGTGAAACACAGTAATGTGTAATAGCCTACGCTATGGTAATGACTTGGAATTGAATACATTTATCATGAGACTGCCACCTCAAATATACTGTGGATTTAATCACATTTTATGTGTATTGATTGTCAATTACATTGTAAATATTTAATTAAACTTTGGATTGGGTTTAAATCTTTATTGCAATGCACTCGTTCTTTATTTTGACTTGTTTCTTAGAAATCCAGTGTCTAAAGTTTCAAATGATAGAACAAAGATAAGCAAGGGTCCTTCTCTCACAGACTGTTGTTTATCTCCCTGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951384.1 True 4031 mRNA 0.49 1 19860204 19864234

Neighbor

gene id symbol gene type direction distance location
LOC110495768 LOC106574536 coding downstream 66750 19762474 ~ 19793454 (-)
trnan-guu-14 NA coding downstream 183472 19676659 ~ 19676732 (-)
LOC110497086 LOC106574531 coding downstream 211453 19584834 ~ 19648751 (-)
LOC110495765 NA coding downstream 278970 19578492 ~ 19581234 (-)
LOC110495764 LOC106574529 coding downstream 283071 19573628 ~ 19577133 (-)
LOC110495773 casq1 coding upstream 95246 19959480 ~ 19967828 (-)
LOC110497091 LOC106574544 coding upstream 186206 20050440 ~ 20058151 (-)
LOC110495778 LOC106575314 coding upstream 249072 20113306 ~ 20140842 (-)
LOC110495781 LOC106574547 coding upstream 314367 20178601 ~ 20192178 (-)
LOC110495785 LOC106574553 coding upstream 375678 20239912 ~ 20248333 (-)
G1524824 NA non-coding downstream 6004 19853920 ~ 19854200 (-)
G1524823 NA non-coding downstream 6546 19853360 ~ 19853658 (-)
G1524820 NA non-coding downstream 8917 19851074 ~ 19851287 (-)
G1524791 NA non-coding downstream 11365 19848369 ~ 19848839 (-)
G1524769 NA non-coding downstream 114925 19742789 ~ 19745279 (-)
G1524831 NA non-coding upstream 1418 19865652 ~ 19865916 (-)
G1524838 NA non-coding upstream 16380 19880614 ~ 19880863 (-)
G1524860 NA non-coding upstream 53141 19917375 ~ 19917756 (-)
G1524893 NA non-coding upstream 108901 19973135 ~ 19974915 (-)
G1524900 NA non-coding upstream 119409 19983643 ~ 19984222 (-)
G1524755 LOC106581475 other downstream 130136 19722745 ~ 19730068 (-)
G1524473 LOC106574589 other downstream 696078 19143985 ~ 19164126 (-)
G1524311 NA other downstream 1110809 18749125 ~ 18749395 (-)
G1523241 NA other downstream 1292957 18561906 ~ 18567247 (-)
LOC110497093 LOC106574562 other upstream 706862 20558557 ~ 20595753 (-)
G1527230 NA other upstream 2397822 22262056 ~ 22262462 (-)
G1528018 NA other upstream 3007811 22872045 ~ 22885833 (-)
LOC110495841 LOC106574435 other upstream 3295324 23008547 ~ 23168591 (-)
LOC110495851 LOC106574449 other upstream 3617306 23479558 ~ 23541681 (-)

Expression


Co-expression Network