poglut1 (poglut1)


Basic Information

Item Value
gene id poglut1
gene name poglut1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 19969508 ~ 19975011 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571195.2
TTACGGTAAGGGTTTTCAGACCAAACTAGAGGCTGACCAAGCATCAGTCATCGCTAACTGTCTAAGCGAAGAAAATGAAGCTGCCGTGGCTCTTGATCCCTCTTCTAATTTTACAGTTTTGTGGAGTTGATTTCAGCGTAGCCGGATCAGGTAATGGTGGCAGGTGGCAGATATACCTTGAAAAGATCACCAAAGCCACGCAACTTTACAAGCCTTGCAGCCCATACAACTGCAGTTGCCATCTCAGTGTCTTGAATGATGACCTACGACCCTTCAGAGAGGGAGTGTCTGAGGAGCTCATGGCGGACACGCTTCGTCGTGGTGTGGGCACCCATTACCAAATCATTAATGGTAAACTGTATCGGGAACAGAACTGTATGTTCCCAGCCAGGTGTAGTGGGGTGGAGCACTTCATCCTGCAGGTGATTGACAAGTTGCCAGACGTGGAGATGGTGGTGAACGTGCGGGACTACCCTCAGGTGCCAGGCTGGGTGCAGCCTATCCTGCCTGTCCTGTCTTTCAGTAAGACTGCTGACTACCAGGACATCATGTATCCTGCCTGGACGTTTTGGGAGGGGGGCCCGGCGGTATGGCCCATATATCCCACTGGACTAGGACGATGGGACCTCATGAGGGATGACCTTAAAAAATCGGCAGCACAGTGGCCCTGGAAGAGGAAAGAGTCCAGAGGATTCTTCAGAGGATCCAGGACGAGTCCTGAGAGGGACCCCCTTGTCCTTCTGTCCAGAGAGGCTCCAGACCTGGTGGATGCTGAGTACACAAAGAACCAGGCCTGGAAGTCTGAGAAGGACACACTAGGGAGACCACCAGCTCAGGAGATTCCCCTGGTGGAGCACTGTCAATACAAGTACCTGTTCAACTTCCGGGGCGTGGCGGCCAGCTTCCGCCTCAAGCACCTGTTCCTGTGTGGCTCTCTGGTCTTCCATGTAGGGGAGGAGTGGCTGGAGTTCTTCTATCCCCAGCTGCTGCCCTGGGTACACTACATCCCTGTCAAACAGGACCTCTCTGACCTCAGGGAACTGCTACAGTTTGTGAAAGAAAACGATGACATCGCTCAAGAGATTGCCGTTAGGGGTCAGCGGTTCATCCTGGACCACCTGAGGATGGAGGACGTGTCGTGTTACTGGGAGAGACTCCTCACTGAGTTCGGTGGGCTGCTCAAGTACAAACTCCAGAGGAAGACTAACTACAATCAGGTCATCCACAAGCATGGGAGGACAGAACTGTGACCGAGCcgtggggggggggtcactgtaTGGACTATATGAAGGCAGCTCCAGATCACACTGCTAATTAATGTCCCTAATGCTGGTCTTAGAATTAGGAATTGCTGGTCTTCATATTTATGCTGTGGTCTCCCCATAGATTCTTCATAGGGTTAGATGTAATGGAGTACCCTTTTAAAGTATTGTGTTATAGAAGATTTAGGAGCTGAAAAATGCTATAAGAAGAAAGCAGCTATTTGGGATTGAAATTACCATTGGGAATAGCACACAGAAAGAGTAGGATACTGTATATGTTGGTTCTATCACACGGTTTACAGTTTGTAtttagcagacctgggttcaaatactgttTAGGGTATTATAATTACTTTCAAATATATGTGGAAGTAattatttagatatttttttaatTTGAAAAGACAGGTATTagaatgtatttggaaatacacttggaaagtatttgaaaatactcaaatacactctCATGCATTTAGCCCAGGCATTCAATTTTTTGATGTTGAAATTAGTATTTGAAAGGGGATAtatagtcagttgtacaactgaatgcattcaactgaaatgtgtttaatgcatttaacccaacccctctgaaaatACAGTACTTTCAAATAATTCCAATAAAAGTAGTTGATTCGGGCCACATTTTTTGAAAATACTTTACTTTCTCTGTATTTACGTAACAAATGatcaaatacacatgtatttgaacccaggcctggtATTTAGTATTTCCATGCTCAAAATATCAGCGACTTTATGCCTCGAAAGGAACTTAGGGTAGAGGATCTATAAAGCGCTTGATAGCGTTTGCTATTAGGCGAAATCAGTTATCTCACTCCATACTGAAATTGTGTGAAAAATCTATGAATTTGGTTGATTCTGGGAAATTACACCTAAAAGGCAATTTTCCATCTGCTTTCCCTTACTGCCCTCTAGTGTGTGACAGAAGCCCTGTATGCTGCTCAGGAGTTGAAACTTACGTCTTCCATTTTATTGCCAGTGGTCCATTCAACtacaaacacaaccaaaacactCCTCACCTCAGAGTGTTGCCTCTGTTTAAGAAGAACAATACACTACCATTGCCATATACTGTAGAGATACGATGTAGCTTGAAACACTACATATTAAGCAGTAAATAACTACACTCAACACCAAGTGCCAATAGAACGTGATTCATTAATGTAGAATGACATGTCAAACCCACTGTCACTACACTACTTTACTTGGACCTGCCTTGGAAAAGATGAGTATGAGCCACAATGGTACTGACATTTTGAATATGTTCAAGTATTCCCATTGTAGAATGTATGTGTTAGTTCTCTGATTCTACAGCTGTGGTATACATGTATGTATGGTACTTTGCACTGTGTATTGTCTTGACCAAAGAGTACGAGGTGCAATGCCAAACTATGTTCAGCTTGTGTTCAAAACATATGATGTGATCTTCATGCTTAGTCAGAGTATTGTATGCACAGAGATTGTACTGCCATGGGCAGGTTGATTCACCTGCAGAATTGGTGGAATAGTTTTGGTTTATCTGTTGGGCTTTAATTATTAGTAATTGATGCTCTTTTTTTGGCTTGAAACACAATGACTATGATATGATGCAATAACAGCCTTTTGTCAATGTTTTGTTTCCTTACATTTTTATATCGAATGTATCATTTTTAACTCCGTAATAAACCATTCAAATCTCAAGTAAAT

Function

symbol description
poglut1 Predicted to enable UDP-glucosyltransferase activity and UDP-xylosyltransferase activity. Predicted to be involved in positive regulation of Notch signaling pathway and protein O-linked glycosylation. Predicted to be active in endomembrane system. Human ortholog(s) of this gene implicated in Dowling-Degos disease and autosomal recessive limb-girdle muscular dystrophy type 2Z. Orthologous to human POGLUT1 (protein O-glucosyltransferase 1).

NR:

description
protein O-glucosyltransferase 1

GO: NA

KEGG:

id description
K13667 POGLUT1, RUMI, KTELC1; EGF-domain serine glucosyl/xylosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571195.2 True 2975 mRNA 0.43 10 19969508 19975011

Neighbor

gene id symbol gene type direction distance location
LOC110495772 LOC106574540 coding upstream 15409 19908603 ~ 19954099 (+)
LOC110495771 LOC106574539 coding upstream 69488 19897030 ~ 19900020 (+)
tlr22 tlr22 coding upstream 121664 19844336 ~ 19847844 (+)
LOC110495770 LOC100136121 coding upstream 132629 19832923 ~ 19836879 (+)
LOC118941119 LOC100136121 coding upstream 149402 19816649 ~ 19820106 (+)
timmdc1 cc001 coding downstream 3 19975014 ~ 19982950 (+)
LOC110495777 LOC106574545 coding downstream 17548 19992559 ~ 20049054 (+)
LOC110495776 LOC106574545 coding downstream 90954 20065965 ~ 20110618 (+)
LOC110495779 LOC106575341 coding downstream 187774 20162785 ~ 20164464 (+)
si:busm1-52i16.2 LOC106574552 coding downstream 192222 20167233 ~ 20170345 (+)
G1523896 NA non-coding upstream 110800 19858106 ~ 19858708 (+)
G1523894 NA non-coding upstream 113453 19855726 ~ 19856055 (+)
G1523871 NA non-coding upstream 120670 19848199 ~ 19848838 (+)
G1523783 NA non-coding upstream 337993 19630938 ~ 19631515 (+)
G1523959 NA non-coding downstream 8214 19983225 ~ 19983481 (+)
G1523962 NA non-coding downstream 10711 19985722 ~ 19986153 (+)
G1523994 NA non-coding downstream 74891 20049902 ~ 20104851 (+)
G1523997 LOC106575314 non-coding downstream 77758 20052769 ~ 20118213 (+)
G1524032 NA non-coding downstream 148837 20123848 ~ 20124587 (+)
G1523847 NA other upstream 141542 19775092 ~ 19827966 (+)
LOC110495769 LOC106575326 other upstream 208488 19748427 ~ 19761242 (+)
G1523703 LOC106575364 other upstream 462252 19506392 ~ 19507256 (+)
LOC110495755 LOC106574522 other upstream 525199 19436699 ~ 19444433 (+)
LOC110495784 LOC106574551 other downstream 231481 20206484 ~ 20236753 (+)
G1524124 LOC106574554 other downstream 330694 20305705 ~ 20306904 (+)
G1524181 LOC106574559 other downstream 498349 20473360 ~ 20483713 (+)

Expression


Co-expression Network