LOC110497092


Basic Information

Item Value
gene id LOC110497092
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20244354 ~ 20245888 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110497092
ATGCTACACGCGGCTATCACCAACCGACACAGTGTCCATAACCATATCCAGTCCCTAAACCACACACTGACCGGCCTTTTTGGGGCTGGTAACTCCATGTCTAACACATATCAGCTGGCTAAACAAACACAATATACTGCATGGATTTCAAATCGAATAACTACTGGTTTTCAGCATCTGGCGCTTGGTGATGATAGTATCATCAAGGCCGTCAAGTCATAAGCTGAGACATTATTGAAGCTTagtcacattttttttgtccaaacCCACACTGTGGAACACAATACAGCTTGTATAACTTACGCACAGGACTTGTTCACAGCTGCACAGCAGGAGATATTGGATCTCCGCCTGGGTAAGGCGCCGCGCCATGCGCTGAACGACCTCATTGTTTCACTTGAACTAGAGAAATGGTTCAAGTCAGACAATATTCAGAATATTTCATATGCAGAACTGTTAGCCACCATTGATGCACAATTCTAAAGGATATTTTGGCTGTATTTGTTTTTATATGACTTTCCCTTTTATATTTCCGGACCCAACATTTCCAACTCGAGCTCCATCCGCCCTTCGTGAGTGGTTGTTAAACACCAATGCATAAAAATGGGATCACTTTGCTGGCTATTGTTGTGTGAAGGGTACTGATCCGTTCTTAACAACTCGGTCTTGTTGTCATGCGACTGTAATAAATATGTCATTTGCACCTGTAATACATTACCACCGGTAACTTTTGACGATACTAAACTGATGAGAGTACGATCATTGCATGCTATTCTGATGCTATCCAAGTGTCTCATACCCAGTGGCGTGTGATAAGTGAGATGAATTCTTTctcctagggggggggggggggggggggggctgacctGTCCAGCTAACCACACTTTCTGCTTGAAATTGACTGAAGATTTCACAATGGGACAGCTGAATATTCTCGGCCGGGTATCCATGTACACTGACATTGCACCCTGGTGGGAGGATACCTTCTATGAGAAGAGCACCAGGTCTCTGACGGAACCCACGGCCATGGTACAGGAGCTTCTGCAGGATACCTGCTACCACCTTGCATGCTCCCAGGTCGAAGTCAACCTGGTCAAGAAGACCGCAACTATCCCGACTAGTGTCTCCATTGCCTCAGCCAAATACACAGGGTGGGACTGGGTGTACCGCGCGTTCTGTCTTGGCAAGCCAGCTTGTGGTAACTATAACTTTAATACGGTGTTGCTTTTGCAGACATTGAATCACCTCTCTTCGTAAGACCACTTCTACTTCTTTCATTATGGCACCTCTGGTTCTTTCCTGGCCCAGAGGTGCCAAACAGGAGATTATTGTAGTCGAAAATAGAGAGAGTAAACTAATGTGA

Function

NR:

description
k23

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110497092 True 1363 mRNA 0.46 2 20244354 20245888

Neighbor

gene id symbol gene type direction distance location
LOC110495784 LOC106574551 coding upstream 7601 20206484 ~ 20236753 (+)
si:busm1-52i16.2 LOC106574552 coding upstream 74009 20167233 ~ 20170345 (+)
LOC110495779 LOC106575341 coding upstream 79890 20162785 ~ 20164464 (+)
LOC110495776 LOC106574545 coding upstream 133736 20065965 ~ 20110618 (+)
LOC110495777 LOC106574545 coding upstream 195300 19992559 ~ 20049054 (+)
LOC110495788 LOC106574550 coding downstream 50129 20296017 ~ 20302100 (+)
LOC110495791 LOC106575306 coding downstream 67649 20312098 ~ 20328610 (+)
LOC110495794 LOC106574560 coding downstream 281791 20527679 ~ 20552117 (+)
LOC110495795 LOC106574563 coding downstream 358998 20604886 ~ 20614129 (+)
LOC110495797 LOC106574564 coding downstream 417523 20663411 ~ 20696331 (+)
G1524069 NA non-coding upstream 32350 20211265 ~ 20212004 (+)
G1524059 NA non-coding upstream 51791 20192335 ~ 20192563 (+)
G1524034 LOC106575314 non-coding upstream 117426 20125068 ~ 20126928 (+)
G1524032 NA non-coding upstream 119767 20123848 ~ 20124587 (+)
G1524092 NA non-coding downstream 4390 20250278 ~ 20250488 (+)
G1524097 NA non-coding downstream 13299 20259187 ~ 20260077 (+)
G1524098 LOC106574546 non-coding downstream 14816 20260704 ~ 20260919 (+)
G1524099 NA non-coding downstream 15543 20261431 ~ 20261658 (+)
G1524100 LOC106574546 non-coding downstream 16242 20262130 ~ 20262714 (+)
LOC110495771 LOC106574539 other upstream 344335 19897030 ~ 19900020 (+)
G1523847 NA other upstream 416388 19775092 ~ 19827966 (+)
G1524124 LOC106574554 other downstream 59817 20305705 ~ 20306904 (+)
G1524181 LOC106574559 other downstream 227472 20473360 ~ 20483713 (+)
G1525320 NA other downstream 510803 20756691 ~ 20757412 (+)
LOC110497098 LOC106574424 other downstream 2353525 22599016 ~ 22641368 (+)
G1528194 NA other downstream 2912945 23158833 ~ 23161291 (+)

Expression


Co-expression Network