LOC110495786 (LOC106574549)


Basic Information

Item Value
gene id LOC110495786
gene name LOC106574549
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 20251274 ~ 20255220 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571215.2
ATGGACCCCAAAGCCATGAAGGAGGAGCTGCGCCTCTTCCAGAGCACCTTGCTCCAGGATGGCCTCAAGGAGCTGCTGAACGAGAACAAGTTTGTGGACTGCACTCTGAAAGTGGGCGATCGGAGCTTCCCCTGCCATAAACTCATCATGGCTGCCTGCAGCCCATACTTCAGAGAGATATTATTTTCCGAGGATGGCAAGGAGGTGAAGGCCAACAAGGAGGTGGTCCTGGACGATGTCAATCCCGCAATCTTGGACATGATAATCATGTATCTGTACTCGGCCGAGATCGACCTCACTGACGAAAATGTGCAGGACATATTTGCCGTAGCCAATCGTTTCCAGATACCTTCAGTCTTCACTGTGTGTGTTAATTATCTTCAGAAGAAGCTCTCCGTGACCAACTGTCTGGCAATCTTCAGGATGGGTCTGGTCCTCAACGTGCCCAGGTTGGCGGTGTCCGCCCGTGACTACATCGCAGACCGCTTCGATATCCTCTCTAAAGACGAGGAGTTCCTCCAGCTGGCCGCTCATGAACTGTTCGCAGTCATCGGTGGCGACTCGCTCAatgtggagagggaggagatggtgttCGAAGCCCTCATGAAATGGGTCCACAACGACAAAGACAAACGTGTCCAGGTACTGGGTGACGCCTTTGAGTGCATCCGCTTCCGCCTCATGCCCGAGAAATACTTCCACGACAAAGTGGAGACAGACGAGATCATCAAGGCCGACCCAGAACTCCTGAAGAAGGTCCAGGTTATCAAAGACGCGTTCCAGGGGAAGCTCccagagaagaaggagaaggtaGCTGGGGATAAGGGGGCGGATGGTGAGGGTGGCGAGTCAGAGGAGGTTTTCCCAGGTTTCCTGAACGATAACCGTCGCCACGGCATGTACGTCCGCGACCTGATCCTGATGATCAACGACACGGCAGCGGTGGCGTACGACGTCAATGAGAACGAGTGTTTCCTGGCGGCCATGTCGGAACAGATCCCCCGGAACCACGTCAGCCTGGCGTCACAGAAGAACCAGCTCTACCTCATCGGAGGACTGTTTGTGGACGAGGAGGACAAGGACGCTCCCCTACAGTGCTACTTCTATCAGTTGGACACTCTTGCAGCTGACTGGGTAGCTCTGCCCCCCATGCCTTCCCCTAGAGCCCTTTTCAACATGGGAGAGTGTGAGAACCTGCTGTTCGCTATTGCTGGAAAAGACCTCCAAAGCAACGAGTGTTTGGACTCTGTGATGTGCTATGATGTCCAGAAGATGAAGTGGAGTGAGACCAAAAAGCTTCCCCTGAAGATCCACGGCCATTCTGTGATCTCCCATAAGGGTCTGGTGTACTGCATTGGAGGAAAGACTGATgacaaCAAAGCCCTGAACAAGATGTTTGTATACAACCACAAGCAGTCAGAGTGGAGGGAGCTGGCTGCCATGAAGACAGCCAGAGCCATGTTCGGAGCCGTCGTTCACAATGGAAAGATCGTGGTGGCCGGTGGAGTCAACGAGGAAGGCCTCACTGCTGCATCTGAAGTCTACGACTTTGGAACAAACAAATGGGAGGCGTTCACAGACTTTCCCCAGGAGAGGAGCTCAGTGAACCTGCTGAGCAATGAGGGGGCCCTGTACGCCGTGGGGGGCTTCACCTTCATCCAGAATGACAACAAGGAGGTGGTCCCCGCAGAGATTACTGATGTTTGGCAGTACGAGGAGGACAAGAAGGAATGGAGCGGGATGCTGAGGGAGATGCGTTACGCCGCTGGCTCCTCCTGCGTATCCATGCGCCTCAATGCTGCCAAGATGCCCAAACTCTAGACCCTCGCTGCCCAGTCATGATTCCCCATGATGCCCTCTGTCTGCCCGGACTACCACCATCTCCTCTGGGTAGTCTTTCCATTTCAGGAATAGAGGGGGTGTCACATGACAACTCAAATGTGGACTCTTATTGGTTGATTGTGTTGTGAGTTTCATTTCTGATCTCAGGTGATTTTCTGTACAACAAAAACATCTGCTTTGCTTCAGTGAAGACCGCATCAGTATATTAGTTTCCCTCATTATAGAGTAACCCACAACGTGTATTTAGCTAGCTTTTttgtaaaataaacatttgttcaaAAA

Function

NR:

description
kelch-like protein 41b

GO: NA

KEGG:

id description
K10473 KBTBD5_10; kelch repeat and BTB domain-containing protein 5/10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571215.2 True 2124 mRNA 0.52 6 20251274 20255220

Neighbor

gene id symbol gene type direction distance location
LOC110495785 LOC106574553 coding downstream 2941 20239912 ~ 20248333 (-)
LOC110495781 LOC106574547 coding downstream 59096 20178601 ~ 20192178 (-)
LOC110495778 LOC106575314 coding downstream 110432 20113306 ~ 20140842 (-)
LOC110497091 LOC106574544 coding downstream 193123 20050440 ~ 20058151 (-)
LOC110495773 casq1 coding downstream 283446 19959480 ~ 19967828 (-)
LOC110495787 LOC106574546 coding upstream 3947 20259167 ~ 20290820 (-)
LOC110495789 LOC106574554 coding upstream 49467 20304687 ~ 20309450 (-)
LOC110495790 LOC106574555 coding upstream 96268 20351488 ~ 20462793 (-)
LOC110495793 LOC106575303 coding upstream 212962 20468182 ~ 20523875 (-)
LOC110497093 LOC106574562 coding upstream 303337 20558557 ~ 20595753 (-)
G1525057 NA non-coding downstream 620 20250407 ~ 20250654 (-)
G1525022 NA non-coding downstream 55260 20195809 ~ 20196014 (-)
G1525012 NA non-coding downstream 83403 20167646 ~ 20167871 (-)
G1524985 LOC106574545 non-coding downstream 146878 20103303 ~ 20104396 (-)
G1525059 NA non-coding upstream 10947 20266167 ~ 20266455 (-)
G1525060 NA non-coding upstream 12027 20267247 ~ 20267735 (-)
G1525035 LOC101478692 non-coding upstream 45336 20300556 ~ 20301395 (-)
G1525105 NA non-coding upstream 272498 20527718 ~ 20528164 (-)
G1525107 NA non-coding upstream 275805 20531025 ~ 20531299 (-)
G1524755 LOC106581475 other downstream 521206 19722745 ~ 19730068 (-)
LOC110495764 LOC106574529 other downstream 674174 19573628 ~ 19577133 (-)
G1524473 LOC106574589 other downstream 1087148 19143985 ~ 19164126 (-)
G1524311 NA other downstream 1501879 18749125 ~ 18749395 (-)
G1523241 NA other downstream 1684027 18561906 ~ 18567247 (-)
G1527230 NA other upstream 2006836 22262056 ~ 22262462 (-)
G1528018 NA other upstream 2616825 22872045 ~ 22885833 (-)
LOC110495841 LOC106574435 other upstream 2904338 23008547 ~ 23168591 (-)
LOC110495851 LOC106574449 other upstream 3226320 23479558 ~ 23541681 (-)

Expression


Co-expression Network