Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110495793 |
| gene name | LOC106575303 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 20468182 ~ 20523875 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| xin actin-binding repeat-containing protein 2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021571225.2 | False | 11557 | mRNA | 0.48 | 9 | 20468182 | 20491683 |
| XM_021571224.2 | False | 13302 | mRNA | 0.47 | 10 | 20468182 | 20520995 |
| XM_021571222.2 | False | 12016 | mRNA | 0.48 | 11 | 20468182 | 20523823 |
| XM_021571223.2 | True | 11907 | mRNA | 0.48 | 11 | 20468182 | 20523875 |
20,420,000
20,430,000
20,440,000
20,450,000
20,460,000
20,470,000
20,480,000
20,490,000
20,500,000
20,510,000
20,520,000
20,530,000
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495790 | LOC106574555 | coding | downstream | 5389 | 20351488 ~ 20462793 (-) |
| LOC110495789 | LOC106574554 | coding | downstream | 158732 | 20304687 ~ 20309450 (-) |
| LOC110495787 | LOC106574546 | coding | downstream | 177362 | 20259167 ~ 20290820 (-) |
| LOC110495786 | LOC106574549 | coding | downstream | 212962 | 20251274 ~ 20255220 (-) |
| LOC110495785 | LOC106574553 | coding | downstream | 219849 | 20239912 ~ 20248333 (-) |
| LOC110497093 | LOC106574562 | coding | upstream | 34682 | 20558557 ~ 20595753 (-) |
| LOC110495796 | LOC106575332 | coding | upstream | 92859 | 20616734 ~ 20620719 (-) |
| LOC118941121 | NA | coding | upstream | 263198 | 20787073 ~ 20835521 (-) |
| zgc:92027 | gran | coding | upstream | 331549 | 20855424 ~ 20863001 (-) |
| LOC110495804 | LOC106574399 | coding | upstream | 376627 | 20900502 ~ 20947386 (-) |
| G1525035 | LOC101478692 | non-coding | downstream | 166787 | 20300556 ~ 20301395 (-) |
| G1525060 | NA | non-coding | downstream | 200447 | 20267247 ~ 20267735 (-) |
| G1525059 | NA | non-coding | downstream | 201727 | 20266167 ~ 20266455 (-) |
| G1525057 | NA | non-coding | downstream | 217528 | 20250407 ~ 20250654 (-) |
| G1525022 | NA | non-coding | downstream | 272168 | 20195809 ~ 20196014 (-) |
| G1525105 | NA | non-coding | upstream | 3843 | 20527718 ~ 20528164 (-) |
| G1525107 | NA | non-coding | upstream | 7150 | 20531025 ~ 20531299 (-) |
| G1525132 | NA | non-coding | upstream | 30048 | 20553923 ~ 20554810 (-) |
| G1525152 | NA | non-coding | upstream | 91911 | 20615786 ~ 20616039 (-) |
| G1525195 | NA | non-coding | upstream | 126307 | 20650182 ~ 20650404 (-) |
| G1524755 | LOC106581475 | other | downstream | 738114 | 19722745 ~ 19730068 (-) |
| LOC110495764 | LOC106574529 | other | downstream | 891082 | 19573628 ~ 19577133 (-) |
| G1524473 | LOC106574589 | other | downstream | 1304056 | 19143985 ~ 19164126 (-) |
| G1524311 | NA | other | downstream | 1718787 | 18749125 ~ 18749395 (-) |
| G1523241 | NA | other | downstream | 1900935 | 18561906 ~ 18567247 (-) |
| G1527230 | NA | other | upstream | 1738181 | 22262056 ~ 22262462 (-) |
| G1528018 | NA | other | upstream | 2348170 | 22872045 ~ 22885833 (-) |
| LOC110495841 | LOC106574435 | other | upstream | 2635683 | 23008547 ~ 23168591 (-) |
| LOC110495851 | LOC106574449 | other | upstream | 2957665 | 23479558 ~ 23541681 (-) |
