Gene
RNA
| Item | Value |
|---|---|
| gene id | gcg1 |
| gene name | gcg1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 20887451 ~ 20890292 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| gcg1 | Enables gamma-glutamylcyclotransferase activity. Involved in glutathione catabolic process. Located in cytoplasm and nucleus. Orthologous to human CHAC1 (ChaC glutathione specific gamma-glutamylcyclotransferase 1) and CHAC2 (ChaC glutathione specific gamma-glutamylcyclotransferase 2). |
| description |
|---|
| glucagon-1 precursor |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| GO:0005179 | hormone activity | molecular_function |
| id | description |
|---|---|
| K05259 | GCG; glucagon |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001124698.1 | True | 1034 | mRNA | 0.42 | 8 | 20887451 | 20890292 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497094 | LOC106575296 | coding | upstream | 2218 | 20872500 ~ 20885233 (+) |
| LOC110495798 | LOC106575297 | coding | upstream | 31808 | 20786069 ~ 20855643 (+) |
| LOC110495797 | LOC106574564 | coding | upstream | 191120 | 20663411 ~ 20696331 (+) |
| LOC110495795 | LOC106574563 | coding | upstream | 273322 | 20604886 ~ 20614129 (+) |
| LOC110495794 | LOC106574560 | coding | upstream | 335334 | 20527679 ~ 20552117 (+) |
| LOC118941068 | adcy10 | coding | downstream | 417 | 20890709 ~ 20900107 (+) |
| LOC110495810 | gemin8 | coding | downstream | 78988 | 20969280 ~ 20979259 (+) |
| LOC110495811 | LOC106574403 | coding | downstream | 89757 | 20980049 ~ 21013013 (+) |
| LOC110495817 | LOC106574411 | coding | downstream | 286333 | 21176625 ~ 21257700 (+) |
| LOC110495818 | LOC106574413 | coding | downstream | 406904 | 21297196 ~ 21333742 (+) |
| G1525384 | NA | non-coding | upstream | 510 | 20886728 ~ 20886941 (+) |
| G1525377 | NA | non-coding | upstream | 21191 | 20865901 ~ 20866260 (+) |
| G1525374 | NA | non-coding | upstream | 40832 | 20846242 ~ 20846619 (+) |
| G1525371 | NA | non-coding | upstream | 45984 | 20839597 ~ 20841467 (+) |
| G1525317 | NA | non-coding | upstream | 135241 | 20751981 ~ 20752210 (+) |
| G1525392 | NA | non-coding | downstream | 6626 | 20896918 ~ 20897122 (+) |
| G1525436 | psde | non-coding | downstream | 65585 | 20955877 ~ 20957111 (+) |
| G1525406 | NA | non-coding | downstream | 131477 | 21021769 ~ 21022152 (+) |
| G1525460 | NA | non-coding | downstream | 135611 | 21025903 ~ 21026132 (+) |
| G1525320 | NA | other | upstream | 130039 | 20756691 ~ 20757412 (+) |
| G1524181 | LOC106574559 | other | upstream | 403738 | 20473360 ~ 20483713 (+) |
| G1524124 | LOC106574554 | other | upstream | 580547 | 20305705 ~ 20306904 (+) |
| LOC110495784 | LOC106574551 | other | upstream | 652271 | 20206484 ~ 20236753 (+) |
| LOC110495776 | LOC106574545 | other | upstream | 811139 | 20065965 ~ 20110618 (+) |
| LOC110497098 | LOC106574424 | other | downstream | 1709121 | 22599016 ~ 22641368 (+) |
| G1528194 | NA | other | downstream | 2268541 | 23158833 ~ 23161291 (+) |
| LOC110495887 | LOC108430494 | other | downstream | 3630443 | 24520697 ~ 24525649 (+) |
| G1530367 | NA | other | downstream | 4114469 | 25004761 ~ 25005609 (+) |
| LOC110495895 | LOC106574270 | other | downstream | 4258691 | 25133210 ~ 25157338 (+) |
