Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110495804 |
| gene name | LOC106574399 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 20900502 ~ 20947386 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| sodium-driven chloride bicarbonate exchanger-like isoform X3 |
| id | description |
|---|---|
| K13861 | SLC4A10, NCBE; solute carrier family 4 (sodium bicarbonate transporter), member 10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036952254.1 | False | 5663 | mRNA | 0.48 | 24 | 20900502 | 20943841 |
| XM_036952253.1 | False | 5857 | mRNA | 0.48 | 26 | 20900502 | 20947382 |
| XM_021571242.2 | False | 5822 | mRNA | 0.48 | 25 | 20900502 | 20947386 |
| XM_021571244.2 | True | 5819 | mRNA | 0.48 | 25 | 20900502 | 20947386 |
20,860,000
20,870,000
20,880,000
20,890,000
20,900,000
20,910,000
20,920,000
20,930,000
20,940,000
20,950,000
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:92027 | gran | coding | downstream | 37501 | 20855424 ~ 20863001 (-) |
| LOC118941121 | NA | coding | downstream | 64981 | 20787073 ~ 20835521 (-) |
| LOC110495796 | LOC106575332 | coding | downstream | 279783 | 20616734 ~ 20620719 (-) |
| LOC110497093 | LOC106574562 | coding | downstream | 304749 | 20558557 ~ 20595753 (-) |
| LOC110495793 | LOC106575303 | coding | downstream | 376627 | 20468182 ~ 20523875 (-) |
| LOC110495806 | LOC106574400 | coding | upstream | 1744 | 20949130 ~ 20955845 (-) |
| LOC110495808 | psde | coding | upstream | 8493 | 20955879 ~ 20966920 (-) |
| LOC110495807 | LOC106574402 | coding | upstream | 20861 | 20968247 ~ 20976998 (-) |
| LOC110495812 | LOC106574405 | coding | upstream | 71160 | 21018546 ~ 21028291 (-) |
| LOC100136027 | NA | coding | upstream | 123496 | 21070882 ~ 21073322 (-) |
| G1525597 | NA | non-coding | downstream | 8155 | 20892069 ~ 20892347 (-) |
| G1525312 | NA | non-coding | downstream | 152064 | 20748190 ~ 20748438 (-) |
| G1525297 | NA | non-coding | downstream | 171350 | 20728920 ~ 20729152 (-) |
| G1525279 | NA | non-coding | downstream | 185115 | 20715175 ~ 20715387 (-) |
| G1525268 | NA | non-coding | downstream | 193421 | 20706677 ~ 20707081 (-) |
| G1525645 | tceanc | non-coding | upstream | 76960 | 21024346 ~ 21024693 (-) |
| G1525646 | NA | non-coding | upstream | 77431 | 21024817 ~ 21025196 (-) |
| G1525649 | NA | non-coding | upstream | 82647 | 21030033 ~ 21030807 (-) |
| G1525650 | NA | non-coding | upstream | 83822 | 21031208 ~ 21031411 (-) |
| G1525651 | NA | non-coding | upstream | 86640 | 21034026 ~ 21034260 (-) |
| G1524755 | LOC106581475 | other | downstream | 1170434 | 19722745 ~ 19730068 (-) |
| LOC110495764 | LOC106574529 | other | downstream | 1323402 | 19573628 ~ 19577133 (-) |
| G1524473 | LOC106574589 | other | downstream | 1736376 | 19143985 ~ 19164126 (-) |
| G1524311 | NA | other | downstream | 2151107 | 18749125 ~ 18749395 (-) |
| G1527230 | NA | other | upstream | 1314670 | 22262056 ~ 22262462 (-) |
| G1528018 | NA | other | upstream | 1924659 | 22872045 ~ 22885833 (-) |
| LOC110495841 | LOC106574435 | other | upstream | 2212172 | 23008547 ~ 23168591 (-) |
| LOC110495851 | LOC106574449 | other | upstream | 2534154 | 23479558 ~ 23541681 (-) |
| LOC110495852 | LOC106574460 | other | upstream | 2595220 | 23542411 ~ 23543631 (-) |
