Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110495808 |
| gene name | psde |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 20955879 ~ 20966920 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 26S proteasome non-ATPase regulatory subunit 14 |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0001878 | response to yeast | biological_process |
| GO:0000502 | proteasome complex | cellular_component |
| GO:0003984 | acetolactate synthase activity | molecular_function |
| id | description |
|---|---|
| K03030 | PSMD14, RPN11, POH1; 26S proteasome regulatory subunit N11 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021571254.2 | True | 1166 | mRNA | 0.52 | 11 | 20955879 | 20966920 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495806 | LOC106574400 | coding | downstream | 34 | 20949130 ~ 20955845 (-) |
| LOC110495804 | LOC106574399 | coding | downstream | 8493 | 20900502 ~ 20947386 (-) |
| zgc:92027 | gran | coding | downstream | 92878 | 20855424 ~ 20863001 (-) |
| LOC118941121 | NA | coding | downstream | 120358 | 20787073 ~ 20835521 (-) |
| LOC110495796 | LOC106575332 | coding | downstream | 335160 | 20616734 ~ 20620719 (-) |
| LOC110495807 | LOC106574402 | coding | upstream | 1327 | 20968247 ~ 20976998 (-) |
| LOC110495812 | LOC106574405 | coding | upstream | 51626 | 21018546 ~ 21028291 (-) |
| LOC100136027 | NA | coding | upstream | 103962 | 21070882 ~ 21073322 (-) |
| LOC110495813 | prps2 | coding | upstream | 108265 | 21075185 ~ 21088022 (-) |
| LOC110495814 | LOC106574409 | coding | upstream | 122433 | 21089235 ~ 21107524 (-) |
| G1525597 | NA | non-coding | downstream | 63532 | 20892069 ~ 20892347 (-) |
| G1525312 | NA | non-coding | downstream | 207441 | 20748190 ~ 20748438 (-) |
| G1525297 | NA | non-coding | downstream | 226727 | 20728920 ~ 20729152 (-) |
| G1525279 | NA | non-coding | downstream | 240492 | 20715175 ~ 20715387 (-) |
| G1525268 | NA | non-coding | downstream | 248798 | 20706677 ~ 20707081 (-) |
| G1525645 | tceanc | non-coding | upstream | 57426 | 21024346 ~ 21024693 (-) |
| G1525646 | NA | non-coding | upstream | 57897 | 21024817 ~ 21025196 (-) |
| G1525649 | NA | non-coding | upstream | 63113 | 21030033 ~ 21030807 (-) |
| G1525650 | NA | non-coding | upstream | 64288 | 21031208 ~ 21031411 (-) |
| G1525651 | NA | non-coding | upstream | 67106 | 21034026 ~ 21034260 (-) |
| LOC110497093 | LOC106574562 | other | downstream | 384012 | 20558557 ~ 20595753 (-) |
| G1524755 | LOC106581475 | other | downstream | 1225811 | 19722745 ~ 19730068 (-) |
| LOC110495764 | LOC106574529 | other | downstream | 1378779 | 19573628 ~ 19577133 (-) |
| G1524473 | LOC106574589 | other | downstream | 1791753 | 19143985 ~ 19164126 (-) |
| G1524311 | NA | other | downstream | 2206484 | 18749125 ~ 18749395 (-) |
| G1527230 | NA | other | upstream | 1295136 | 22262056 ~ 22262462 (-) |
| G1528018 | NA | other | upstream | 1905125 | 22872045 ~ 22885833 (-) |
| LOC110495841 | LOC106574435 | other | upstream | 2192638 | 23008547 ~ 23168591 (-) |
| LOC110495851 | LOC106574449 | other | upstream | 2514620 | 23479558 ~ 23541681 (-) |
| LOC110495852 | LOC106574460 | other | upstream | 2575686 | 23542411 ~ 23543631 (-) |
