Item | Value |
---|---|
gene id | LOC110495807 |
gene name | LOC106574402 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048582.1 |
NCBI id | CM023236.2 |
chromosome length | 74657750 |
location | 20968247 ~ 20976998 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021571250.2 | False | 2653 | mRNA | 0.45 | 16 | 20968247 | 20976867 |
XM_036952257.1 | False | 2649 | mRNA | 0.45 | 16 | 20968247 | 20976867 |
XM_021571249.2 | False | 2647 | mRNA | 0.45 | 16 | 20968247 | 20976907 |
XM_021571252.2 | False | 2647 | mRNA | 0.45 | 16 | 20968247 | 20976911 |
XM_021571251.2 | False | 2649 | mRNA | 0.45 | 16 | 20968247 | 20976934 |
XM_036952256.1 | False | 2590 | mRNA | 0.45 | 16 | 20968247 | 20976937 |
XM_036952255.1 | False | 2621 | mRNA | 0.45 | 16 | 20968247 | 20976959 |
XM_021571253.2 | True | 2655 | mRNA | 0.45 | 16 | 20968247 | 20976998 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110495808 | psde | coding | downstream | 1327 | 20955879 ~ 20966920 (-) |
LOC110495806 | LOC106574400 | coding | downstream | 12402 | 20949130 ~ 20955845 (-) |
LOC110495804 | LOC106574399 | coding | downstream | 20861 | 20900502 ~ 20947386 (-) |
zgc:92027 | gran | coding | downstream | 105246 | 20855424 ~ 20863001 (-) |
LOC118941121 | NA | coding | downstream | 132726 | 20787073 ~ 20835521 (-) |
LOC110495812 | LOC106574405 | coding | upstream | 41548 | 21018546 ~ 21028291 (-) |
LOC100136027 | NA | coding | upstream | 93884 | 21070882 ~ 21073322 (-) |
LOC110495813 | prps2 | coding | upstream | 98187 | 21075185 ~ 21088022 (-) |
LOC110495814 | LOC106574409 | coding | upstream | 112355 | 21089235 ~ 21107524 (-) |
LOC110495815 | LOC106574410 | coding | upstream | 187580 | 21164578 ~ 21173972 (-) |
G1525597 | NA | non-coding | downstream | 75900 | 20892069 ~ 20892347 (-) |
G1525312 | NA | non-coding | downstream | 219809 | 20748190 ~ 20748438 (-) |
G1525297 | NA | non-coding | downstream | 239095 | 20728920 ~ 20729152 (-) |
G1525279 | NA | non-coding | downstream | 252860 | 20715175 ~ 20715387 (-) |
G1525268 | NA | non-coding | downstream | 261166 | 20706677 ~ 20707081 (-) |
G1525645 | tceanc | non-coding | upstream | 47348 | 21024346 ~ 21024693 (-) |
G1525646 | NA | non-coding | upstream | 47819 | 21024817 ~ 21025196 (-) |
G1525649 | NA | non-coding | upstream | 53035 | 21030033 ~ 21030807 (-) |
G1525650 | NA | non-coding | upstream | 54210 | 21031208 ~ 21031411 (-) |
G1525651 | NA | non-coding | upstream | 57028 | 21034026 ~ 21034260 (-) |
LOC110497093 | LOC106574562 | other | downstream | 396380 | 20558557 ~ 20595753 (-) |
G1524755 | LOC106581475 | other | downstream | 1238179 | 19722745 ~ 19730068 (-) |
LOC110495764 | LOC106574529 | other | downstream | 1391147 | 19573628 ~ 19577133 (-) |
G1524473 | LOC106574589 | other | downstream | 1804121 | 19143985 ~ 19164126 (-) |
G1524311 | NA | other | downstream | 2218852 | 18749125 ~ 18749395 (-) |
G1527230 | NA | other | upstream | 1285058 | 22262056 ~ 22262462 (-) |
G1528018 | NA | other | upstream | 1895047 | 22872045 ~ 22885833 (-) |
LOC110495841 | LOC106574435 | other | upstream | 2182560 | 23008547 ~ 23168591 (-) |
LOC110495851 | LOC106574449 | other | upstream | 2504542 | 23479558 ~ 23541681 (-) |
LOC110495852 | LOC106574460 | other | upstream | 2565608 | 23542411 ~ 23543631 (-) |