LOC110495813 (prps2)


Basic Information

Item Value
gene id LOC110495813
gene name prps2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 21075185 ~ 21088022 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571265.2
GCGAGCCGCCAAAACAATCccaaataagaagaagaagaagaattagGAAGCGGCATTTCCGCTCTACCATGCAAACACGATTCTCACTTCCTTTTCAGTTTTAGGTCTCCTCTCGTGCTGATCTGCTATGCGTGGGCTACAACGATAATAAGTTAACTTGTTAGCTAACTTGCCCCTCGAGGGATAATTGTTGCATCCAAAATCTCCTACTCGCATAACCAAATTGCACAGACATATTTAGGACATGCCGAACATCGTGCTTTTCAGCGGGAGCTCCCACCAAGACCTGTCACAAAAAGTGGCTGATCGCCTCGGACTGGAATTGGGGAAAGTGATAACGAAGAAATTCTCCAACCAAGAAACATGCGTGGAGATCGGGGAGAGCGTGCGCGGCGAGGACGTCTACATTGTGCAGAGCGGCTGCGGCGAGATCAACGACAACCTGATGGAGCTGCTGATCATGATCAACGCGTGCAAGATCGCCTCGTCGTCCCGAGTCACCGCCGTCATCCCCTGCTTCCCCTACGCCCGGCAGGATAAAAAAGACAAGAGTCGcgctcccatctcagccaagctGGTGGCCAACATGCTGTCTGTAGCCGGCGCCGACCACATCATCACAATGGACCTCCACGCCTCGCAGATCCAGggatTCTTCGACATCGCCGTGGACAACCTGTATGCAGAGCCCGCGGTCCTCCAGTGGATCCGGGAGAACATTCCAGAGTGGAAGAACAGCTGCATTGTGTCCCCTGACGCTGGAGGAGCCAAACGAGTGACCTCCATAGCTGACCGTCTGAATGTGGAGTTTGCCCTCATCCacaaggagaggaagaaggcCAACGAGGTGGACCGCATGGTCCTGGTCGGAGACGTGAAGGACCGCGTGGCCATCCTGGTCGACGACATGGCCGACACCTGCGGCACCATCTGCAAAGCTGCTGAGAAATTGATTGATGCCGGTGCGATCAAGGTCTATGCTATCCTCACGCACGGCATATTTTCCGGTCCGGCCATCACGCGCATCAACGATGCTCCCTTCGAGGCCGTGGTGGTCACCAACACCATCCCCCAGGAGGAGAAGATGAAGTCGTGCCCAAAGATACAGATCATAGATATAGCCATGATCCTGGCCGAGGCGATCAGGAGAACCCACAACGGCGAGTCGGTGTCCTACCTCTTCAGCCACGTTCCCTTGTAAAGGATGGCCACGAGCAGAGGCCACAGCAGCCATTTCCTCTCCTCATGGTCCAATCAGCTCGCACCTTCAATGACCCCCGCCCTCCCTGAAGTCCTTAAACCCTGACGGTTTGGGCCAATTACATGTGACCGATTCCTGAAGGCCACGCCCACTTTCCCAGCTCCGTTGTTCCGTGTGGAGACCCAAGAAAGAGTATCACCTCCTCTGAGACCAGCAAGTTTCTATTTATGCGTATTACCATGTTAAGATTTCCTTActgtgtttgtttcaatatcATGCTTTGCCAGCCTTGCCACCCAAGGGATCTGGCTGTCGTTTTAACCGAAGGTCCATTGCCTAACAATGTTCCTGTTTGTTGTACCTCATTTTCCTTCCATTTCACTATAAATGAAAGCATTCCATTGTGTGATGTCACTTCTTGATTCATCTGACTGTTCTAACCTGCTCTCTGGAGAATCTGCAACGCTGCTGGTTTTAGAGGCACCTTTGTTTCATCAATACACACCGATTACGAAATACCAGGGTCCTATTCACTAGACTAAAAACAGTAGCAAATGGGGAGGGACTATCTGTACAATAAGAAATGCCTGTCTTAATTTTCTGTTGCAGGATTTTTTGCTACGGTGTGTGCTAATCAATGCCACCTAGGGTTGTTTAGTCATCAACGACTGATTTTGTTTTtgatttctttatttctttaaCCAGCAACATTTTTGGTTAGTGTGGGACTTTTTTCTCTCAAAAAAATCTAGAGTAGAGGCTGTATTTGTTCAACCAGTAAATAGATTCCTACATAATGTTTAAGCATCTATCTAGCATTGTCTTCTTAACGTCCCAATATTGTATCATGGAATTCAATTCAGATATGAGAGAGACCGTTTGGAAGCATTTCCACAATTTCTGGCATTCTAGTTTCAAACATTATTTCGTTAGTGCCACGTTACAAGGCCAAATCTGATTTGCCATTTTAGTTTCCTTCATTTAGTATGCCCCTGGTGGTGCACTCCCTCTTGTGACGGACT

Function

symbol description
prps2 Enables identical protein binding activity. Predicted to be involved in 5-phosphoribose 1-diphosphate biosynthetic process and purine nucleotide biosynthetic process. Predicted to be part of ribose phosphate diphosphokinase complex. Predicted to be active in cytoplasm.

NR:

description
ribose-phosphate pyrophosphokinase 2-like

GO:

id name namespace
GO:0009165 nucleotide biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0004749 ribose phosphate diphosphokinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K00948 PRPS, prsA; ribose-phosphate pyrophosphokinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571265.2 True 2223 mRNA 0.49 7 21075185 21088022

Neighbor

gene id symbol gene type direction distance location
LOC100136027 NA coding downstream 1921 21070882 ~ 21073322 (-)
LOC110495812 LOC106574405 coding downstream 46894 21018546 ~ 21028291 (-)
LOC110495807 LOC106574402 coding downstream 98187 20968247 ~ 20976998 (-)
LOC110495808 psde coding downstream 108265 20955879 ~ 20966920 (-)
LOC110495806 LOC106574400 coding downstream 119340 20949130 ~ 20955845 (-)
LOC110495814 LOC106574409 coding upstream 1331 21089235 ~ 21107524 (-)
LOC110495815 LOC106574410 coding upstream 76556 21164578 ~ 21173972 (-)
LOC118941122 LOC106610709 coding upstream 134789 21222811 ~ 21227447 (-)
LOC110495819 LOC106575280 coding upstream 718372 21806394 ~ 21812566 (-)
LOC110495824 LOC106575275 coding upstream 1376174 22464196 ~ 22477509 (-)
G1525657 NA non-coding downstream 31902 21043055 ~ 21043283 (-)
G1525655 NA non-coding downstream 34002 21040776 ~ 21041183 (-)
G1525654 NA non-coding downstream 34422 21040451 ~ 21040763 (-)
G1525653 NA non-coding downstream 35160 21039689 ~ 21040025 (-)
G1525723 NA non-coding upstream 66846 21154868 ~ 21155103 (-)
G1525867 NA non-coding upstream 123776 21211798 ~ 21213206 (-)
G1525915 LOC106574411 non-coding upstream 167223 21255245 ~ 21257699 (-)
G1525918 NA non-coding upstream 174420 21262442 ~ 21262669 (-)
LOC110497093 LOC106574562 other downstream 503318 20558557 ~ 20595753 (-)
G1524755 LOC106581475 other downstream 1345117 19722745 ~ 19730068 (-)
LOC110495764 LOC106574529 other downstream 1498085 19573628 ~ 19577133 (-)
G1524473 LOC106574589 other downstream 1911059 19143985 ~ 19164126 (-)
G1524311 NA other downstream 2325790 18749125 ~ 18749395 (-)
G1527230 NA other upstream 1174034 22262056 ~ 22262462 (-)
G1528018 NA other upstream 1784023 22872045 ~ 22885833 (-)
LOC110495841 LOC106574435 other upstream 2071536 23008547 ~ 23168591 (-)
LOC110495851 LOC106574449 other upstream 2393518 23479558 ~ 23541681 (-)
LOC110495852 LOC106574460 other upstream 2454584 23542411 ~ 23543631 (-)

Expression


Co-expression Network