LOC110495822 (LOC106575275)


Basic Information

Item Value
gene id LOC110495822
gene name LOC106575275
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 22475774 ~ 22477639 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571279.2
TGCCAGCCGGAGGGGTCCTTCTTCAGAGCCAAGATGGAGACCAGTACTCAAAATGGCAGTGGTGGCGGAGGGTCGGCCGGCTTGCTGCGTGCTTTGCGTGACAGCGGGAGGCTACACCGGCCTCACCATGCCCAGGAAGGGCAGCCCGATCCTGGGGTAAACATCAGCCAGCAGGCCCCTGTGCTCTCGCTGGACCAGATCAGGATCATCGGGAGCAGTAATGAGTACACAGAGGGACCAACGGTGGGACCCATTGTGGTGCCTAGGCCCCCTGGCTCCTTGCCCACCCAGCAGAAGAATGACCTGGTGGTGCCACTGGACCTGGGGACCAATGAGCAACTGGAGCCCCAGGACTCCAGGCCCAACCAGAGGAACTTACTTCCCCAACTTCCTCAGCCCACACACTCCACAGTCCCCCCTAGGGATGCCCTATCTCTTTCTTCTAGCACAGAGGGCTCCAGAAACAGCCCGAGAACCAGTACAGGCAGCACGTCTTCCGTGCAGAGGCTCCTGGGTAGCCCGGCGGTTAGCGAACGGATAATCAGGACCCAGCCCAAACGGGTGGAGCTTAAACAGGACGAATTGAAGCTCCTGGCGAGTACGGTCGGAGGGGCGGTGGTGGTTACGGTGCCCGGTGGCGGTGCTCCTGCCGCTAGGGAGGGGCTGCTGGGTAAACATGTCTACCGCTGTGAGGACTGTGGCCGGTGCAAGTGCCAGGAGTGCATGTGCCCGCGCGCCCTGCCCTCCTGCTGGATGTGCGGCCGACAGTGCGTATGCTCGGCGCAGAACGCGGTGGACTACGGGACTTGCGTGTGCTGTGTCAAGGGCCTGTTCTATCACTGCTCCAGTGACGACGAGGATACATGCGCTGACAAGCCCTTCTCCTGCAGCCAGTCGCACTGCTGCGTGCGCTGGTCGGCCATGGGCCTCCTTTCCCTGTTCCTACCCTGTCTCCTGTGCTACCTCCCAGCTAAAGGGTGTCTTGCCGCGTGCCAGAGCTGCTACGACCGCGTCAAGCGACCGGGGTGCCGGTGTAAGAACACTAACGTTGTCCACTGTAAGAGCGTTGACTGTAAGCCAACGTAAAGGGAAAGTACCTTGGGTGTTGTGGAGAATCGATGGGGGTTGACAACTTTGGGCAACTGAAACGATCACCTCATCACGTTTTGGCCCAGTAGTCAGAAGTTGATTGGGGGATTGGCTAAGCTGAGCTGTTTGATGTGGTTTGTGTCGTTTGTTTTCAGCTATGGTTGTTAATACAGGCTGCTTGATCACCAAGTATCCTGATTTTGTATTGTTTTAATCGAAGTCCAGAATGTTAGCTCTTTTGACATTTATTAATTACAACTGATATGCTATGGACAGACTCTCCTGACTAACTTGTTTGTGAATAGTAATCGCAAAAATATGTAAATTAGCAAATGACCTCCTCAGAGAtgttttatttttgtatatataataTTTCAACTGTGCAAAGCATTCTGCCAAACCAGAGGCACCTTGATGATAGAtccatatatattatataatacaaTGTTTAATGTTGTACATTCATGGGAATGTATATCAATCATTTTTTATGTTTGCCTTACAAGAGAAGGACATTTACACATCTTATCCCTTCAACTCCACATGTAAATTGTACAGTGACCCTATAAGAAAATCTTTATTTTCTAATTTCAACATTGTTTTAGTGGAAAGAATATTTATTTGAagttttattattttataaagaaaatatttattttgagAAGCATCTTAAAAAAACATCAGCCTGTTCAAGTACTCTGATGTTGTTGCAAGTTAGGGTGACTAGGGTGTCAAATTGGATGCATATGTTCGCTatgaaatagaaaaatatattaa

Function

NR:

description
protein sprouty homolog 2-like

GO:      GO:0044699

KEGG:

id description
K17383 SPRY2; protein sprouty homolog 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571279.2 True 1866 mRNA 0.50 1 22475774 22477639

Neighbor

gene id symbol gene type direction distance location
LOC110495821 LOC106575277 coding upstream 350324 22119777 ~ 22125450 (+)
LOC110495820 LOC106574417 coding upstream 536501 21926653 ~ 21939273 (+)
LOC110495818 LOC106574413 coding upstream 1142032 21297196 ~ 21333742 (+)
LOC110495817 LOC106574411 coding upstream 1218074 21176625 ~ 21257700 (+)
LOC110495811 LOC106574403 coding upstream 1462761 20980049 ~ 21013013 (+)
LOC110495826 LOC106575273 coding downstream 89029 22566668 ~ 22596390 (+)
LOC110497098 LOC106574424 coding downstream 121377 22599016 ~ 22641368 (+)
LOC110495829 LOC106574429 coding downstream 222703 22700342 ~ 22713534 (+)
LOC110495834 LOC106574432 coding downstream 273049 22750688 ~ 22752806 (+)
LOC110495835 en1 coding downstream 291752 22769391 ~ 22773674 (+)
G1527341 NA non-coding upstream 83968 22391407 ~ 22391806 (+)
G1527279 NA non-coding upstream 164138 22303769 ~ 22311636 (+)
G1527254 NA non-coding upstream 198250 22277307 ~ 22277524 (+)
G1527235 NA non-coding upstream 208753 22266796 ~ 22267021 (+)
G1527216 NA non-coding upstream 221884 22253656 ~ 22253890 (+)
G1527384 NA non-coding downstream 3062 22480701 ~ 22480916 (+)
G1527395 NA non-coding downstream 16791 22494430 ~ 22494654 (+)
G1527398 NA non-coding downstream 19533 22497172 ~ 22497382 (+)
G1527403 NA non-coding downstream 23506 22501145 ~ 22501407 (+)
G1527420 NA non-coding downstream 68417 22546056 ~ 22609747 (+)
G1525320 NA other upstream 1718362 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 1992061 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 2168870 20305705 ~ 20306904 (+)
LOC110495784 LOC106574551 other upstream 2240594 20206484 ~ 20236753 (+)
LOC110495776 LOC106574545 other upstream 2399462 20065965 ~ 20110618 (+)
G1528194 NA other downstream 681194 23158833 ~ 23161291 (+)
LOC110495887 LOC108430494 other downstream 2043096 24520697 ~ 24525649 (+)
G1530367 NA other downstream 2527122 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 2671344 25133210 ~ 25157338 (+)

Expression


Co-expression Network