LOC110495831 (LOC106574427)


Basic Information

Item Value
gene id LOC110495831
gene name LOC106574427
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 22726121 ~ 22734181 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571297.2
AAAAAACATGAATTCAACAATAATTTGTGGCCACTGTTttgctgtagctagctagttaaagtATAAATAGGACATTTTTAGAAGTTGGCCAAGTTTGTCGAAAAGAGTTGGTAGTTCCGTGTTCTTTATTTTGGAGAAAAAAGTTAGCTAGCAAGCATTGCTTTCAACCAAGCAATAACAGctcagGACAGGATGCCCCAGGAGGAGATGAAGAAGCCTCTTATACTTGGTGGTGCCAGCCCCAGACACCTCAAAACCTCAATTTCTGATCCAGGTACCCCCTTGGTTGGCATCCTGGGCACAGGTGACTTTTCCCGCTCTTTAGCCACCAGGCTGGTAGCCTCTGGGTACCGGGTGGTAGTGGGTAGCCGCAACCCCAAGCGCTGTGCCTCCCTCTTTCCCGAGGAGGCTGAGGTGACCACCCAGCACCAGGCTGCCACCCAGGCTGACCTGGTGTTCGTGGCCCTTTTCCCCGAGCACTACTCCACCCTGGCTGGACTGAGGGAGCCGCTAGTGGGGAAGACTCTGGTGGATGTTAGTAATGGTACTAAGATCAACAGGGATAAGCAGTCCTACGCGGAGCAGCTGGCCAATATCTTCCCAGAGAGCAGTGTGGTGAAGGCCTTCAATGTGATCTCGGCCTGGAGCCTGCAGACGGGGCCAAGGGACGGCAGCAGACAGGTGCTGATTTGCAGTGACAGTAGTAAGGCCAAGAGCGCTGTACTCCAGATCTGCCGCAGTCTGGGCTTCATCCCTGTTGACATGGGCCGCCTCTCCTCTGCCCAGGAGATAGAGAACACCCCCCTGTACCTCTTCCCCTCGTGGCGCGTCCCATGTCTCTCCACCCTcagcctcttcttcttcttctacgcCTACAACTTTCTTCGTGACGTCGTCCACCCGTATGCCACGGCAGGGAAGAGCACATTCTACAAAATTCCGGTGGAGATGGTAAACGTGACACTCCCCTCGGTGGCCTTGGTGACCCTGGCTCTGGTCTACCTGCCTGGCCTTGTGGCTGCCTTCCTGCAGCTGTCGTGGGGCACCAAGTACAGGCGTTTCCCCAACTGGTTGGATCGCTGGCTGCAGCAGCGGAAGCAGTTGGGCCTCTGTGCCTTCCTCTGCGCAGCGCTGCACGCCGTCTACAGCCTGTGTTTGCCCATGCGCAGGTCTGCTCGCTACAATCTGCTCAACGCTGCCTTCAAACAGGTGAAGGTAGGCCAGGAAGACTcgtgggtagaggaggaggtgtggaggatGGAGCTGTATCTGTCTATAGGCATCCTGGCCCTGGGccttctctctctgctggctATCTCCTCACTGCCCACTGTGGGCAACTCGCTCAACTGGAGGGAGTTCAGCTTCGTACAGtCCAGACTGGGCTACATGGCCCTGTTGATGGCCACCCTCCACACGCTGACCTATGGCTGGGACCGGGGCTTGGACCCGGAGCAGTATCGTTTCTACCTCCCTCCCACCTTCTTGCTGGTGCTGGCCCTGCCGCTGGCTGTGCTGCTGGGGAGGCTGGCTCTGTCCCTGCCATGCGTGGCTCTCCGGCTGAGTCGTATCAGGAGGGGTTGGGAGAAAAGCCGAGCCATCCGGTTCACACTGCCTGAGGACGAGCGTAATGGGCCATCACAGGAGGACATCAGTAATGTTTGAGAGATGCTTGGTTTAGTCTTACATGCAGGATTGAATGAAGGAAGcatggaagacacacacacacacacacacacacagaggcaggcaagtggagatgggagagaagtaCTGACTGTGTCATATTAAGGGATGTAATCTCACCAACAGTAGCCTTATGCATCAAAAGCAATTTAGGGATTTCATTGGCCTTTGTTATACTCGTGAACATGCTTCTTGTTTGGTAGACATGTCATCTCTAGCACTACCATCTAACTTGGTATTTTTATCAAGAGAAATGAACTATGGTTCTATTGCTCACTAAGCCTCCGACACATGTACAGTGATGCATTTTGGAGATGACTATTATAGTGCTGCGTTTAATTCGCTGCCACTACTCCCTTTAACTAAACTGGAAACCAGACATTGTCATTGTCTTTCTACTGGTGTCTTAGCCAGTCAGATACTGGGCATCCAATGCTAtcaggtaaaaaaaacaacaaccttgtACTGTCTCAGGCTTACACTTCAACGTGAGGGAAGCCTGGGCATCCAACACTGTAGTTGTAGTGCTGTTAGATGCCTCAGCTCTGTCTGCCCTGCTCGTGGCTGAATCTGGCTCAGCTGTCTGATTTGCCTGCTGTGGTCAGTCAGAGCTAAAATGTTGCACCTCACAGCAATGTCATCGGTTGTTCGGTGGTGTCATGCCTGCTTCTGCTGTGTAATCACTTCTTACTGCATCGGcgatgtgttaaaaaaaaaaaaaatagagctTTATATTTTTTTGCCTTAGGCTATTGTTGCATTGTTTTGATGCGTCAATGAATGCACTATAATGTTTATACTTTACCTGGTCAGAGTCTTTCAAAGATCAAATGTGTACCAAAGATTGTGAAAATATATTATCGAAGATTGCAAAAATGTACTATCGAGTCCCAAATTGTTGCTGGCACCAAACCCAATCGAGGATGGctcatgttttgtttttgtgttgaaGTTACACTGTTATAGGTATAATTTAAATATGATGACATTGTATAAAATGTACTAATTTTATTGAACAATCAAACTAACCGGCTGTCATGGAGACTCTATGGTACATGTGAAATTGTAAGAGCTATTTTATATTCTGACTGTTACATTTCTTCTGTTAAATGCAATAAGTTCCATAGGTTTATCCACAAAAGGAAATCAAAGACATGTATATTCTTATAGTGCTTATTGGCAGAATAAACACACTATTTTCCACAATTTA
>XM_021571296.2
TGGGGAAGAACTTATCTTCTTCACACAGAGGGGGCAGTTGGGGCGGGGACGGATTTCTGAGTCACAAAGTTATGAGCGCAAGACATAAATACACAGACGTCGAGAAAGctcagGACAGGATGCCCCAGGAGGAGATGAAGAAGCCTCTTATACTTGGTGGTGCCAGCCCCAGACACCTCAAAACCTCAATTTCTGATCCAGGTACCCCCTTGGTTGGCATCCTGGGCACAGGTGACTTTTCCCGCTCTTTAGCCACCAGGCTGGTAGCCTCTGGGTACCGGGTGGTAGTGGGTAGCCGCAACCCCAAGCGCTGTGCCTCCCTCTTTCCCGAGGAGGCTGAGGTGACCACCCAGCACCAGGCTGCCACCCAGGCTGACCTGGTGTTCGTGGCCCTTTTCCCCGAGCACTACTCCACCCTGGCTGGACTGAGGGAGCCGCTAGTGGGGAAGACTCTGGTGGATGTTAGTAATGGTACTAAGATCAACAGGGATAAGCAGTCCTACGCGGAGCAGCTGGCCAATATCTTCCCAGAGAGCAGTGTGGTGAAGGCCTTCAATGTGATCTCGGCCTGGAGCCTGCAGACGGGGCCAAGGGACGGCAGCAGACAGGTGCTGATTTGCAGTGACAGTAGTAAGGCCAAGAGCGCTGTACTCCAGATCTGCCGCAGTCTGGGCTTCATCCCTGTTGACATGGGCCGCCTCTCCTCTGCCCAGGAGATAGAGAACACCCCCCTGTACCTCTTCCCCTCGTGGCGCGTCCCATGTCTCTCCACCCTcagcctcttcttcttcttctacgcCTACAACTTTCTTCGTGACGTCGTCCACCCGTATGCCACGGCAGGGAAGAGCACATTCTACAAAATTCCGGTGGAGATGGTAAACGTGACACTCCCCTCGGTGGCCTTGGTGACCCTGGCTCTGGTCTACCTGCCTGGCCTTGTGGCTGCCTTCCTGCAGCTGTCGTGGGGCACCAAGTACAGGCGTTTCCCCAACTGGTTGGATCGCTGGCTGCAGCAGCGGAAGCAGTTGGGCCTCTGTGCCTTCCTCTGCGCAGCGCTGCACGCCGTCTACAGCCTGTGTTTGCCCATGCGCAGGTCTGCTCGCTACAATCTGCTCAACGCTGCCTTCAAACAGGTGAAGGTAGGCCAGGAAGACTcgtgggtagaggaggaggtgtggaggatGGAGCTGTATCTGTCTATAGGCATCCTGGCCCTGGGccttctctctctgctggctATCTCCTCACTGCCCACTGTGGGCAACTCGCTCAACTGGAGGGAGTTCAGCTTCGTACAGtCCAGACTGGGCTACATGGCCCTGTTGATGGCCACCCTCCACACGCTGACCTATGGCTGGGACCGGGGCTTGGACCCGGAGCAGTATCGTTTCTACCTCCCTCCCACCTTCTTGCTGGTGCTGGCCCTGCCGCTGGCTGTGCTGCTGGGGAGGCTGGCTCTGTCCCTGCCATGCGTGGCTCTCCGGCTGAGTCGTATCAGGAGGGGTTGGGAGAAAAGCCGAGCCATCCGGTTCACACTGCCTGAGGACGAGCGTAATGGGCCATCACAGGAGGACATCAGTAATGTTTGAGAGATGCTTGGTTTAGTCTTACATGCAGGATTGAATGAAGGAAGcatggaagacacacacacacacacacacacacagaggcaggcaagtggagatgggagagaagtaCTGACTGTGTCATATTAAGGGATGTAATCTCACCAACAGTAGCCTTATGCATCAAAAGCAATTTAGGGATTTCATTGGCCTTTGTTATACTCGTGAACATGCTTCTTGTTTGGTAGACATGTCATCTCTAGCACTACCATCTAACTTGGTATTTTTATCAAGAGAAATGAACTATGGTTCTATTGCTCACTAAGCCTCCGACACATGTACAGTGATGCATTTTGGAGATGACTATTATAGTGCTGCGTTTAATTCGCTGCCACTACTCCCTTTAACTAAACTGGAAACCAGACATTGTCATTGTCTTTCTACTGGTGTCTTAGCCAGTCAGATACTGGGCATCCAATGCTAtcaggtaaaaaaaacaacaaccttgtACTGTCTCAGGCTTACACTTCAACGTGAGGGAAGCCTGGGCATCCAACACTGTAGTTGTAGTGCTGTTAGATGCCTCAGCTCTGTCTGCCCTGCTCGTGGCTGAATCTGGCTCAGCTGTCTGATTTGCCTGCTGTGGTCAGTCAGAGCTAAAATGTTGCACCTCACAGCAATGTCATCGGTTGTTCGGTGGTGTCATGCCTGCTTCTGCTGTGTAATCACTTCTTACTGCATCGGcgatgtgttaaaaaaaaaaaaaatagagctTTATATTTTTTTGCCTTAGGCTATTGTTGCATTGTTTTGATGCGTCAATGAATGCACTATAATGTTTATACTTTACCTGGTCAGAGTCTTTCAAAGATCAAATGTGTACCAAAGATTGTGAAAATATATTATCGAAGATTGCAAAAATGTACTATCGAGTCCCAAATTGTTGCTGGCACCAAACCCAATCGAGGATGGctcatgttttgtttttgtgttgaaGTTACACTGTTATAGGTATAATTTAAATATGATGACATTGTATAAAATGTACTAATTTTATTGAACAATCAAACTAACCGGCTGTCATGGAGACTCTATGGTACATGTGAAATTGTAAGAGCTATTTTATATTCTGACTGTTACATTTCTTCTGTTAAATGCAATAAGTTCCATAGGTTTATCCACAAAAGGAAATCAAAGACATGTATATTCTTATAGTGCTTATTGGCAGAATAAACACACTATTTTCCACAATTTA
>XM_021571298.2
TGGGGAAGAACTTATCTTCTTCACACAGAGGGGGCAGTTGGGGCGGGGACGGATTTCTGAGTCACAAAGTTATGAGCGCAAGACATAAATACACAGACGTCGAGAAAGctcagGACAGGATGCCCCAGGAGGAGATGAAGAAGCCTCTTATACTTGGTGGTGCCAGCCCCAGACACCTCAAAACCTCAATTTCTGATCCAGGTACCCCCTTGGTTGGCATCCTGGGCACAGGTGACTTTTCCCGCTCTTTAGCCACCAGGCTGGTAGCCTCTGGGTACCGGGTGGTAGTGGGTAGCCGCAACCCCAAGCGCTGTGCCTCCCTCTTTCCCGAGGAGGCTGAGGTGACCACCCAGCACCAGGCTGCCACCCAGGCTGACCTGGTGTTCGTGGCCCTTTTCCCCGAGCACTACTCCACCCTGGCTGGACTGAGGGAGCCGCTAGTGGGGAAGACTCTGGTGGATGTTAGTAATGGTACTAAGATCAACAGGGATAAGCAGTCCTACGCGGAGCAGCTGGCCAATATCTTCCCAGAGAGCAGTGTGGTGAAGGCCTTCAATGTGATCTCGGCCTGGAGCCTGCAGACGGGGCCAAGGGACGGCAGCAGACAGGTGCTGATTTGCAGTGACAGTAGTAAGGCCAAGAGCGCTGTACTCCAGATCTGCCGCAGTCTGGGCTTCATCCCTGTTGACATGGGCCGCCTCTCCTCTGCCCAGGAGATAGAGAACACCCCCCTGTACCTCTTCCCCTCGTGGCGCGTCCCATGTCTCTCCACCCTcagcctcttcttcttcttctacgcCTACAACTTTCTTCGTGACGTCGTCCACCCGTATGCCACGGCAGGGAAGAGCACATTCTACAAAATTCCGGTGGAGATGGTAAACGTGACACTCCCCTCGGTGGCCTTGGTGACCCTGGCTCTGGTCTACCTGCCTGGCCTTGTGGCTGCCTTCCTGCAGCTGTCGTGGGGCACCAAGTACAGGCGTTTCCCCAACTGGTTGGATCGCTGGCTGCAGCAGCGGAAGCAGTTGGGCCTCTGTGCCTTCCTCTGCGCAGCGCTGCACGCCGTCTACAGCCTGTGTTTGCCCATGCGCAGGTCTGCTCGCTACAATCTGCTCAACGCTGCCTTCAAACAGGTGAAGGTAGGCCAGGAAGACTcgtgggtagaggaggaggtgtggaggatGGAGCTGTATCTGTCTATAGGCATCCTGGCCCTGGGccttctctctctgctggctATCTCCTCACTGCCCACTGTGGGCAACTCGCTCAACTGGAGGGAGTTCAGCTTCGTACAGGGATGAGGATGAAATGGGTGAGTCACGACTGAACCTTCCCACCTGTCAAGGtCCAGACTGGGCTACATGGCCCTGTTGATGGCCACCCTCCACACGCTGACCTATGGCTGGGACCGGGGCTTGGACCCGGAGCAGTATCGTTTCTACCTCCCTCCCACCTTCTTGCTGGTGCTGGCCCTGCCGCTGGCTGTGCTGCTGGGGAGGCTGGCTCTGTCCCTGCCATGCGTGGCTCTCCGGCTGAGTCGTATCAGGAGGGGTTGGGAGAAAAGCCGAGCCATCCGGTTCACACTGCCTGAGGACGAGCGTAATGGGCCATCACAGGAGGACATCAGTAATGTTTGAGAGATGCTTGGTTTAGTCTTACATGCAGGATTGAATGAAGGAAGcatggaagacacacacacacacacacacacacagaggcaggcaagtggagatgggagagaagtaCTGACTGTGTCATATTAAGGGATGTAATCTCACCAACAGTAGCCTTATGCATCAAAAGCAATTTAGGGATTTCATTGGCCTTTGTTATACTCGTGAACATGCTTCTTGTTTGGTAGACATGTCATCTCTAGCACTACCATCTAACTTGGTATTTTTATCAAGAGAAATGAACTATGGTTCTATTGCTCACTAAGCCTCCGACACATGTACAGTGATGCATTTTGGAGATGACTATTATAGTGCTGCGTTTAATTCGCTGCCACTACTCCCTTTAACTAAACTGGAAACCAGACATTGTCATTGTCTTTCTACTGGTGTCTTAGCCAGTCAGATACTGGGCATCCAATGCTAtcaggtaaaaaaaacaacaaccttgtACTGTCTCAGGCTTACACTTCAACGTGAGGGAAGCCTGGGCATCCAACACTGTAGTTGTAGTGCTGTTAGATGCCTCAGCTCTGTCTGCCCTGCTCGTGGCTGAATCTGGCTCAGCTGTCTGATTTGCCTGCTGTGGTCAGTCAGAGCTAAAATGTTGCACCTCACAGCAATGTCATCGGTTGTTCGGTGGTGTCATGCCTGCTTCTGCTGTGTAATCACTTCTTACTGCATCGGcgatgtgttaaaaaaaaaaaaaatagagctTTATATTTTTTTGCCTTAGGCTATTGTTGCATTGTTTTGATGCGTCAATGAATGCACTATAATGTTTATACTTTACCTGGTCAGAGTCTTTCAAAGATCAAATGTGTACCAAAGATTGTGAAAATATATTATCGAAGATTGCAAAAATGTACTATCGAGTCCCAAATTGTTGCTGGCACCAAACCCAATCGAGGATGGctcatgttttgtttttgtgttgaaGTTACACTGTTATAGGTATAATTTAAATATGATGACATTGTATAAAATGTACTAATTTTATTGAACAATCAAACTAACCGGCTGTCATGGAGACTCTATGGTACATGTGAAATTGTAAGAGCTATTTTATATTCTGACTGTTACATTTCTTCTGTTAAATGCAATAAGTTCCATAGGTTTATCCACAAAAGGAAATCAAAGACATGTATATTCTTATAGTGCTTATTGGCAGAATAAACACACTATTTTCCACAATTTA

Function

NR:

description
metalloreductase STEAP3-like isoform X1

GO: NA

KEGG:

id description
K10142 STEAP3, TSAP6; metalloreductase STEAP3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571297.2 False 2896 mRNA 0.49 5 22726121 22734066
XM_021571296.2 False 2823 mRNA 0.50 5 22726121 22734181
XM_021571298.2 True 2874 mRNA 0.50 6 22726121 22734181

Neighbor

gene id symbol gene type direction distance location
LOC110495830 LOC106575269 coding downstream 158 22713900 ~ 22725963 (-)
LOC110495828 cfap221 coding downstream 26001 22695302 ~ 22700120 (-)
LOC110497099 NA coding downstream 35773 22680498 ~ 22690348 (-)
LOC110495827 LOC106574421 coding downstream 135129 22537987 ~ 22590992 (-)
LOC110495825 LOC106574420 coding downstream 204106 22513221 ~ 22522015 (-)
LOC110495832 LOC106575264 coding upstream 7014 22741195 ~ 22746929 (-)
LOC110495836 NA coding upstream 119059 22853240 ~ 22859683 (-)
LOC110495837 LOC106575263 coding upstream 163768 22897949 ~ 22948690 (-)
LOC110495838 LOC106574434 coding upstream 230167 22964348 ~ 22977609 (-)
LOC110495839 LOC106575259 coding upstream 264409 22998590 ~ 23007852 (-)
G1527852 NA non-coding downstream 45738 22680045 ~ 22680383 (-)
G1527749 NA non-coding downstream 201819 22523930 ~ 22524302 (-)
G1527742 NA non-coding downstream 217117 22508790 ~ 22509004 (-)
G1527899 en1 non-coding upstream 35263 22769444 ~ 22773617 (-)
G1527957 NA non-coding upstream 126433 22860614 ~ 22860839 (-)
G1528052 NA non-coding upstream 217380 22951561 ~ 22951775 (-)
G1528860 NA non-coding upstream 232083 22966264 ~ 22991309 (-)
G1528876 NA non-coding upstream 258521 22992702 ~ 22992926 (-)
G1527230 NA other downstream 463659 22262056 ~ 22262462 (-)
LOC110497093 LOC106574562 other downstream 2154254 20558557 ~ 20595753 (-)
G1524755 LOC106581475 other downstream 2996053 19722745 ~ 19730068 (-)
LOC110495764 LOC106574529 other downstream 3149021 19573628 ~ 19577133 (-)
G1524473 LOC106574589 other downstream 3561995 19143985 ~ 19164126 (-)
G1528018 NA other upstream 137864 22872045 ~ 22885833 (-)
LOC110495841 LOC106574435 other upstream 425377 23008547 ~ 23168591 (-)
LOC110495851 LOC106574449 other upstream 747359 23479558 ~ 23541681 (-)
LOC110495852 LOC106574460 other upstream 808425 23542411 ~ 23543631 (-)
LOC110497104 LOC106574262 other upstream 1545557 24279738 ~ 24371432 (-)

Expression


Co-expression Network