Item | Value |
---|---|
gene id | LOC110495832 |
gene name | LOC106575264 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048582.1 |
NCBI id | CM023236.2 |
chromosome length | 74657750 |
location | 22741195 ~ 22746929 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
proline-rich extensin-like protein EPR1 isoform X2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036952274.1 | False | 3574 | mRNA | 0.53 | 11 | 22741195 | 22746929 |
XM_036952275.1 | False | 3568 | mRNA | 0.53 | 11 | 22741195 | 22746929 |
XM_036952276.1 | True | 3544 | mRNA | 0.53 | 11 | 22741195 | 22746929 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110495831 | LOC106574427 | coding | downstream | 7014 | 22726121 ~ 22734181 (-) |
LOC110495830 | LOC106575269 | coding | downstream | 15232 | 22713900 ~ 22725963 (-) |
LOC110495828 | cfap221 | coding | downstream | 41075 | 22695302 ~ 22700120 (-) |
LOC110497099 | NA | coding | downstream | 50847 | 22680498 ~ 22690348 (-) |
LOC110495827 | LOC106574421 | coding | downstream | 150203 | 22537987 ~ 22590992 (-) |
LOC110495836 | NA | coding | upstream | 106311 | 22853240 ~ 22859683 (-) |
LOC110495837 | LOC106575263 | coding | upstream | 151020 | 22897949 ~ 22948690 (-) |
LOC110495838 | LOC106574434 | coding | upstream | 217419 | 22964348 ~ 22977609 (-) |
LOC110495839 | LOC106575259 | coding | upstream | 251661 | 22998590 ~ 23007852 (-) |
LOC110495841 | LOC106574435 | coding | upstream | 261618 | 23008547 ~ 23168591 (-) |
G1527852 | NA | non-coding | downstream | 60812 | 22680045 ~ 22680383 (-) |
G1527749 | NA | non-coding | downstream | 216893 | 22523930 ~ 22524302 (-) |
G1527742 | NA | non-coding | downstream | 232191 | 22508790 ~ 22509004 (-) |
G1527899 | en1 | non-coding | upstream | 22515 | 22769444 ~ 22773617 (-) |
G1527957 | NA | non-coding | upstream | 113685 | 22860614 ~ 22860839 (-) |
G1528052 | NA | non-coding | upstream | 204632 | 22951561 ~ 22951775 (-) |
G1528860 | NA | non-coding | upstream | 219335 | 22966264 ~ 22991309 (-) |
G1528876 | NA | non-coding | upstream | 245773 | 22992702 ~ 22992926 (-) |
G1527230 | NA | other | downstream | 478733 | 22262056 ~ 22262462 (-) |
LOC110497093 | LOC106574562 | other | downstream | 2169328 | 20558557 ~ 20595753 (-) |
G1524755 | LOC106581475 | other | downstream | 3011127 | 19722745 ~ 19730068 (-) |
LOC110495764 | LOC106574529 | other | downstream | 3164095 | 19573628 ~ 19577133 (-) |
G1524473 | LOC106574589 | other | downstream | 3577069 | 19143985 ~ 19164126 (-) |
G1528018 | NA | other | upstream | 125116 | 22872045 ~ 22885833 (-) |
LOC110495851 | LOC106574449 | other | upstream | 734611 | 23479558 ~ 23541681 (-) |
LOC110495852 | LOC106574460 | other | upstream | 795677 | 23542411 ~ 23543631 (-) |
LOC110497104 | LOC106574262 | other | upstream | 1532809 | 24279738 ~ 24371432 (-) |