LOC110495838 (LOC106574434)


Basic Information

Item Value
gene id LOC110495838
gene name LOC106574434
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 22964348 ~ 22977609 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571308.2
CTTTCAACTTCCGCGTCAGGTGATTGCGGAGGTAACTTCACTCTGCGGGTTCAGGGTTCCGCctctaaactagctagctaaataaatgGTTATCCCTCTACCCAAAACAAACGAATTTCCTTTTTATAAGACCCATTGGAATAAAGCAGCAATTCACGATTGCACTCTGCAGTAGATATTTAAGAAAACATGGCTGGACGTCTACCGGCTTGTGTAGTTGACTGTGGCACAGGGTACACAAAGATTGGATATGCTGGAAACACAGAGCCACAGTTTATTGTTCCTTCATGTATTGCCATCAAAGAGTCGGCCAAGGTTGGAGACCAAGCCCAGCGCAGGATGACGAAGGGGGTGGACGATCTGGACTTTTACATCGGTGACGAGGCAATAGACAAACCAAATTATGCAACAAAGTGGCCCATTCGTCATGGGATCGTGGATGACTGGGATCTCATGGAGAGGTTCATGGAACAGGTCATCTTCAAGTATCTGAGGGCAGAGCCCGAAGACCACTACTTCCTCTTGACAGAGCCTCCTCTGAATACCCCTGAAAACCGAGAGTACACAGCAGAGATAATGTTTGAGTCCTTCAACGTTCCAGGTCTTTACATCGCTGTACAGGCGGTCCTGGCGCTGGCAGCCTCATGGACCTCCAGACAATTGGGCGAGAGGACCCTGACGGGGACGGTGATTGACAGCGGTGACGGGGTCACCCACGTCATCCCAGTGGCAGAAGGCTACGTCATCGGTAGCTGTATAAAGCACATCCCCATCGCTGGTCGAGACATCACCTACTTCACCCAGCAGCTGCTGAGAGAGCGGGAGGTGGGCATCCCACCAGAGCAGTCATTGGAAACAGCCAAAGCCATCAAGGAAAGGTTCAGTTATGTCTGCCCTGACCTGGTGAAAGAGTTCAACAAGTACGATACGGACGGCTCTAAGTGGATCAAGCAGTACACGGGCATCAACTCCATCAGCAAGAAGGAGTTCACCATCGACGTGGGCTACGAGCGCTTCCTTGGCCCTGAGATCTTCTTCCACCCAGAGTTTGCCAACCCCGACTTCACCCAACCCATCTCCGAGGTTGTTGATGAAGTCATTCAGAACTGCCCTATCGACGTCAGACGTCCCCTCTATAAGAACATCGTGCTCTCTGGAGGCTCCACTATGTTCAGAGACTTTGGCCGACGTCTGCAGAGGGACCTGAAAAGGACAGTGGATGGCAGACTGAAACTCAGTGAGGAACTGAGCGGTGGCAAGCTGAAGCCCAAACCCGTCGACGTGCAAGTCATCACTCACCACATGCAGAGATATGCTGTTTGGTTCGGCGGGTCTATGTTGGCATCAACTCCGGAGTTTTACCAAGTGTGCCACACCAAAAAAGACTATGAGGAAATCGGACCGAGCATCTGCCGCCATAACCCTGTCTTCGGGGTCATGTCTTAAAAAAGACTTCCCTCAGTTATCACTGGAGCTTGCATTTTGGAGCAGAATGGAGTGGACGGACAGAGGCAGAGTGGCATTACTGCACTACGGTCGCTGCTTAATCCAGCCTATTTCCAGGGCTACGGTTAAAGACAAAATACAGGAAGAGAATGACAGAAATGGAATGACTAGATTCTATTCCTATGGAGAATGACTCATTTATCAACTGCAGACCAACTATCAGGCTGACAAACGGGGGGTGAATATCTATGTAAAAGAGAAGGAAATGGTGTCTTAGAAGCATTTTCAGAGCAATTGTGTGGACACAAAATAATGTGCAAGATAATAAAGGCAACTCATGTATGGTTAA

Function

NR:

description
actin-related protein 3-like

GO: NA

KEGG:

id description
K18584 ACTR3, ARP3; actin-related protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571308.2 True 1795 mRNA 0.49 12 22964348 22977609

Neighbor

gene id symbol gene type direction distance location
LOC110495837 LOC106575263 coding downstream 15658 22897949 ~ 22948690 (-)
LOC110495836 NA coding downstream 104665 22853240 ~ 22859683 (-)
LOC110495832 LOC106575264 coding downstream 217419 22741195 ~ 22746929 (-)
LOC110495831 LOC106574427 coding downstream 230167 22726121 ~ 22734181 (-)
LOC110495830 LOC106575269 coding downstream 238385 22713900 ~ 22725963 (-)
LOC110495839 LOC106575259 coding upstream 20981 22998590 ~ 23007852 (-)
LOC110495841 LOC106574435 coding upstream 30938 23008547 ~ 23168591 (-)
LOC110495844 LOC106574437 coding upstream 204210 23181819 ~ 23186607 (-)
LOC110495845 LOC106574439 coding upstream 235922 23213531 ~ 23223410 (-)
LOC110495846 LOC106574440 coding upstream 271431 23249040 ~ 23265087 (-)
G1528052 NA non-coding downstream 12573 22951561 ~ 22951775 (-)
G1527957 NA non-coding downstream 103509 22860614 ~ 22860839 (-)
G1527899 en1 non-coding downstream 190731 22769444 ~ 22773617 (-)
LOC110497099 NA non-coding downstream 283624 22680498 ~ 22690348 (-)
G1528876 NA non-coding upstream 15093 22992702 ~ 22992926 (-)
G1528840 NA non-coding upstream 18310 22995919 ~ 22997491 (-)
G1528841 NA non-coding upstream 20186 22997795 ~ 22998261 (-)
G1528896 NA non-coding upstream 69089 23046698 ~ 23046921 (-)
G1528899 NA non-coding upstream 73246 23050855 ~ 23051101 (-)
G1528018 NA other downstream 78515 22872045 ~ 22885833 (-)
G1527230 NA other downstream 701886 22262056 ~ 22262462 (-)
LOC110497093 LOC106574562 other downstream 2392481 20558557 ~ 20595753 (-)
G1524755 LOC106581475 other downstream 3234280 19722745 ~ 19730068 (-)
LOC110495764 LOC106574529 other downstream 3387248 19573628 ~ 19577133 (-)
LOC110495851 LOC106574449 other upstream 503931 23479558 ~ 23541681 (-)
LOC110495852 LOC106574460 other upstream 564997 23542411 ~ 23543631 (-)
LOC110497104 LOC106574262 other upstream 1302129 24279738 ~ 24371432 (-)
G1529613 NA other upstream 1415766 24393375 ~ 24393684 (-)

Expression


Co-expression Network