LOC110495844 (LOC106574437)


Basic Information

Item Value
gene id LOC110495844
gene name LOC106574437
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 23181819 ~ 23186607 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571314.2
GGCGGCGTGCTAAAAAAGAATGTGCTGCCCACACGACTAGGGCGTATAAGGAAGTTATGGACATGGTTATAAACACGGCATTTTACTGATCCCTTAACACTGTTCAAGGAATCGTGGCTGCTACTCTACCTTAAACATGCCTGCTAAGAAAGTGTGCATCGTTGGATCCGGAAACTGGGGCTCTGCGATAGCCAAAATCGTTGGTCACAATGCAAAGGGATCCAACAGGTTTGACCCCATTGTTAACATGTGGGTGTTTGAAGAGATGATCGATGGCAAAAAGTTAACAGAAATCATCAACACAGAGCATGAGAACGTCAAATACCTACCGGGTCACAAGCTTCCCAAAAATGTGGTTGCTGTTCCAGAAATCACAGAAGCGGTGAAAGGGGCCAGCATACTGATCTTTGTCATTCCACATCAGTTCATTGGGAGGCTATGCGATCAGATGAAACCTCATATTGCACAGGGAACCATTGGGATATCCCTCATCAAAGGCATCGATGAAGGCCCCGAGGGCTTGAAGCTCATCTCTGACATCATCCGTGAGAAACTGGAAATCGAGGTTAGCGTCCTGATGGGGGCCAACATTGCCAACGAAGTGGCTGATGAGAAGTTCTGTGAGACCACAATTGGAGCTAAGAACGAAGCAAACGGACATGTCTTTAAAGAGCTGCTGCAGACTCCCAACTTCAGGATCACCGTGGTGCAGGAGAGTGACACCGTAGAACTCTGTGGGGCTCTCAAGAATATTGTAGCGGTGGGCGCTGGGTTCTGTGACGGTCTGGGCTTTGGGGACAACACCAAGGCTGCGGTGATCCGGCTTGGGCTGATGGAGATGATCGCCTTCACCAAGCTGTTCTGTAAGGGCCAGGTTTCCTCTGTGACCTTCCTGGAGAGCTGTGGCGTCGCCGACCTGATCACCACCTGCTACGGGGGGCGCAACCGCAAGGTGGCCGAGGCCTTCGCCAAGACATCCAAGTCTATTGAAGAGCTAGAGGCTGAGATGCTCAATGGTCAGAAGCTCCAAGGCCCACAAACCTCCGCTGAGGTGTTCAAAATTCTCAAGAAGAGAGACATGATCAGCAAGTTTCCGTTGTTTGCCTCTGTGTACCAGATCTGCTTTGAGGGCAAAGCTGTGCAGGAGTTTATCACATGTCTGCAGAGCCACCCTGAACATATGTGATCACTCTGGAACCTGCAGCCACGGAACCTGCTGCTCCTCCAATGGTGTCgagtgaagttgcccctagatgctgatcttgtcAGTTTTGCATTCCCTTATGGTTAGGTTGGGATTggagaggggaagctgatcctagacctgtaccTATAGGGCAACTTCACCCCCGGAGCCACTTCCAGTAGCACCATCATACCATCAGAGGGCAGCAGCGCTGCATAAATGCTCATTCATATCATTGTAACTACCTAAAAATTTAACTGTAACCACTAAATATTCCTTATCATTTCATACTAAGTCTGAAGAACCACTACTTAACGTGCTTTGTCGCATATTCATATGTTTTGTGTTTTGATTGTGTATCAGCTTATCAACTAAACCAACTACACTTGACACGTGTAAAGTCATCTTTGTTGGTTACAAAAATGTTTTCTATTCATTTAACAATTTTACAATTTGTGGAACAAATATTCTCAAAATAATAATTTTGAGTGAAAAACAAA

Function

NR:

description
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic-like

GO: NA

KEGG:

id description
K00006 GPD1; glycerol-3-phosphate dehydrogenase (NAD+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571314.2 True 1686 mRNA 0.47 8 23181819 23186607

Neighbor

gene id symbol gene type direction distance location
LOC110495841 LOC106574435 coding downstream 13375 23008547 ~ 23168591 (-)
LOC110495839 LOC106575259 coding downstream 173967 22998590 ~ 23007852 (-)
LOC110495838 LOC106574434 coding downstream 204210 22964348 ~ 22977609 (-)
LOC110495837 LOC106575263 coding downstream 233129 22897949 ~ 22948690 (-)
LOC110495836 NA coding downstream 322136 22853240 ~ 22859683 (-)
LOC110495845 LOC106574439 coding upstream 26924 23213531 ~ 23223410 (-)
LOC110495846 LOC106574440 coding upstream 62433 23249040 ~ 23265087 (-)
LOC110495850 LOC106574444 coding upstream 152150 23338757 ~ 23362793 (-)
LOC110496920 LOC106574445 coding upstream 273229 23459836 ~ 23478565 (-)
LOC110495851 LOC106574449 coding upstream 292951 23479558 ~ 23541681 (-)
G1528964 NA non-coding downstream 1509 23180037 ~ 23180310 (-)
G1528963 NA non-coding downstream 1786 23179766 ~ 23180033 (-)
G1528962 NA non-coding downstream 2497 23179123 ~ 23179322 (-)
G1528915 NA non-coding downstream 103174 23078416 ~ 23078645 (-)
G1528911 NA non-coding downstream 109546 23072014 ~ 23072273 (-)
G1528972 NA non-coding upstream 9557 23196164 ~ 23248930 (-)
G1529050 LOC106574443 non-coding upstream 153893 23340500 ~ 23342444 (-)
G1529062 NA non-coding upstream 170384 23356991 ~ 23357190 (-)
G1529083 NA non-coding upstream 200899 23387506 ~ 23387761 (-)
G1529084 NA non-coding upstream 201629 23388236 ~ 23388473 (-)
G1528018 NA other downstream 295986 22872045 ~ 22885833 (-)
G1527230 NA other downstream 919357 22262056 ~ 22262462 (-)
LOC110497093 LOC106574562 other downstream 2609952 20558557 ~ 20595753 (-)
G1524755 LOC106581475 other downstream 3451751 19722745 ~ 19730068 (-)
LOC110495852 LOC106574460 other upstream 355999 23542411 ~ 23543631 (-)
LOC110497104 LOC106574262 other upstream 1093131 24279738 ~ 24371432 (-)
G1529613 NA other upstream 1206768 24393375 ~ 24393684 (-)
G1530967 LOC106574270 other upstream 1963461 25150068 ~ 25150994 (-)

Expression


Co-expression Network