LOC118941123 (LOC106574249)


Basic Information

Item Value
gene id LOC118941123
gene name LOC106574249
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24114290 ~ 24116592 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952340.1
CAACTGAACGTTTTTATTGCAAGGTTACAGAAATGCTGTACTTTATGCACACCGCGTGCAAAGCATCAACTCCTGAGGACCTGACAGAAGCTGTAAGAAAGAGCAGATGATTCTTTCATAACATGTCCTTCTTTTGATTGTTAAATTGTGTGACAGATGACTTCAATCAGAGTAATAGTAGTAGAGATGGTTTTAATACTTCAACATTTCAGGATGGCTTATGATTAGTGTCACGATGGGTCAGTTATGGACACCAAAATATACAATTTCCAGTCACTCAATTTGAACACAAAATGCTTTCCTATAGTTATTAAGCTGTATATACTCGGAAGCTCCTACCCATCCACATCTGACATTGCGACCTCTTTTGGAACCCATTTGGAACAAATCTAAATCCAATCCTGGTGGCAGACAGTTTTAGCAGTACCCTGTGTACCCAGATCCCCATTTCAGGGCTATAGAGGTATCTGTGGTCTCAGACAGAGGTAATCTTGTCtagccctgtctctccccctgaaAGAGGAGCTCGGGAGAGGGGATCCGCAGTCGCTGGGATACCCTGAGGAAGATGACCCGCCGAAGGCTGATCCACGGTGGGGCCAGGGCTGTGGAGGGCCCCTGGCACGGTGTGGGGGCTCTGGGGGACGTAGTGCCCGGGGAGCGACCAGTCATGCCCAGCACAAGGAGAGTCAGCTACCCACCAGCTGAATTGCTATCTTCTGCAGGTCCACCACCCCTGGGCAAGCCCCGCGCTCTGCCACATTTTAAGCCAATGAGTAACTGCAGAACGTACCAGACTGATGCACTCTGGAAAGAAGGTCTTAATCGCTCTGCCCCCTCGGTCTGTAGCTCTGTCCTGATTGATAATGTGATCGAGGAGCTAGACAGCGACGAAGACAGAGAGTCAGCTAACACCCTGTCCCCTCTCCCACACCACAATCCACCCCTCCAGCCCCGGACTCTCACCCCTCCCTGCATGGCTGCATTCCATCTCTCCATGGGTAACTACCACCATTCCCCTGGAACTCCTCCGCGGTTCCGGAGCTACAGCGTCAGTCCCCGGGTGCGCACGGCTCCCCCCAGCCCCATGCAGCATCGGCGGGTAGATGAGATGCCTCTCAACCCCCCTGTGGAGCTGGCTAAGCAGAAGAGCCTGGATGAGTTGAGGTCCACAGTGCAGCAGGCTGCCAGCTCTATGGAGCGCAGCACCAATGATGTCCGGCTGCTGGGGCAGAAGATGGCCGCCGCCACAGAGCGCATGTCTGAGAGTGTCCAGGAGAATGCCCAGGCCCTGACACTGCTGGCCCAGGTGGTGAGCAGACTGCAGACACTCATCGCTGCCAGCAGGGCGGTAGCAGATACACCGGAACCACACAGAGGAACCAGCAGCAGTAGCCTGCCAGTCAACATATCAGCCAGGGTACAAGAACACACAGCCAGCAGCTTGAAGACTCAGACGTCCCTTTCACACCAGTCCAGAGTATGCTCCCTgaacacctcttcctcctcctccagctccttcaCTGGCTCTATGGATGGCATATCCACATCCCAGGGGAAGATCTCTCAGCCTCGGCCCCCAGCCTGTAATGGGTCACCCAAAGCAGGGTTGAAGACCAGGGTTCCGCCTATGTCTCCCAAAAAGCATGTTGGTGCTTCCCCCACATCTCAAAAGAAGCATGTGGAGCCCCAGCAACCCCACCTCTACAACAGCCTCTCAACACCTCCACCACCTGCCCCACCTGCCCCCAACCACAACAAGACTGGCTGCTGCTCCAGCTCCAGCCaggggaagaagaagaggaagtgaACCAGCCAGGAGGACAGTGGTGCTCTGGTATCTTCAGGGGATCTTATATTCCTCTGCTTCAGGGAATGGTCCTCTCCTCAAGATTCCCTCAGAGATCTCGGCTTCAAAAGGCATTTAACCTTCTGTTATCTTCGTCACCATCATGTCGCCCCCCCCATTCATCCCACAATTGTTATGTGTTGGCTATGTTCATTGTTGCGTTTCCATCCTCAAGCAATCCGTCTGTGTTTCATGCTACTCTGTTTCCCGAATGTCATCTGTTATTTTCACATTATTTCATTTTGTAATTGTAAATAAAGC

Function

NR:

description
formin-like protein 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952340.1 True 2110 mRNA 0.53 2 24114290 24116592

Neighbor

gene id symbol gene type direction distance location
LOC110497102 LOC106574246 coding upstream 13648 24078733 ~ 24100642 (+)
LOC110495871 sumo1 coding upstream 116688 23994022 ~ 23997602 (+)
LOC110495865 LOC106574241 coding upstream 195645 23911979 ~ 23918645 (+)
LOC110495861 LOC106574235 coding upstream 334658 23769548 ~ 23779632 (+)
LOC110495854 LOC106574228 coding upstream 463157 23587611 ~ 23651133 (+)
LOC110495876 LOC106575177 coding downstream 6164 24122756 ~ 24134227 (+)
LOC110495879 LOC106574251 coding downstream 31409 24148001 ~ 24153085 (+)
LOC110495878 LOC106574254 coding downstream 36653 24153245 ~ 24167595 (+)
shroom2b NA coding downstream 59719 24176311 ~ 24199430 (+)
LOC110497103 LOC106574257 coding downstream 82982 24199574 ~ 24201614 (+)
G1528760 NA non-coding upstream 6515 24106210 ~ 24107775 (+)
G1528762 NA non-coding upstream 10454 24103507 ~ 24103836 (+)
G1528763 NA non-coding upstream 27215 24086854 ~ 24087075 (+)
G1528755 NA non-coding upstream 40277 24073803 ~ 24074013 (+)
G1528754 NA non-coding upstream 41177 24072718 ~ 24073113 (+)
G1528766 NA non-coding downstream 13337 24129929 ~ 24130679 (+)
G1528779 NA non-coding downstream 148930 24265522 ~ 24265839 (+)
G1528789 NA non-coding downstream 162310 24278902 ~ 24279115 (+)
G1528791 NA non-coding downstream 163262 24279854 ~ 24280075 (+)
G1528792 NA non-coding downstream 164769 24281361 ~ 24281731 (+)
G1528194 NA other upstream 952999 23158833 ~ 23161291 (+)
LOC110497098 LOC106574424 other upstream 1502838 22599016 ~ 22641368 (+)
G1525320 NA other upstream 3356878 20756691 ~ 20757412 (+)
G1524181 LOC106574559 other upstream 3630577 20473360 ~ 20483713 (+)
G1524124 LOC106574554 other upstream 3807386 20305705 ~ 20306904 (+)
LOC110495887 LOC108430494 other downstream 404143 24520697 ~ 24525649 (+)
G1530367 NA other downstream 888169 25004761 ~ 25005609 (+)
LOC110495895 LOC106574270 other downstream 1032391 25133210 ~ 25157338 (+)
G1530785 NA other downstream 1449879 25566471 ~ 25571346 (+)
G1530923 LOC106574292 other downstream 1721914 25838506 ~ 25840353 (+)

Expression


Co-expression Network