LOC110495882 (LOC106574255)


Basic Information

Item Value
gene id LOC110495882
gene name LOC106574255
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 24167580 ~ 24175983 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571393.2
CTCATGTGACCCGTTCGggatgttttgtgtttttttttttagcaacgTCATTGTAATCAGAGGCCGCACGAAGACATTCCTGCAGAAGGTGATTTCGTCGCTTGGTCTAACATTTAGATTTTACAAATGGTGAAGGTAACATTTAACTCGTCCTTTGGACAAAGGGATTTGAAGAAAGCATGCAATGCCGAAGCGCTTATTCCGGAGGAGAGGGACCTGGAGGATGGCATGCGAGTGCGTCGGCAGTCCAAGGTGTGCTGCTGGTACAGGTGCCTGGGCCTGGCTCTCATGCTGTCaggtgtggtggtgggaggggccTACCTTTACAAGACCTACATACTGGAGCGCAGGGTGTATTGGTGCGGGGTGGATTACCTTGAGCAGGACTACATGGTTCAGGACGAGGACGAGGTGGTCTTGCCCTCTGCGCTGAGACACATCCAGGAGAGCATCCGTGTGCTGGAGGAGGTGGAGCTAATCAACGTGCCCGTGCCCGAGTTCTCCGACAGCGACCCGGCCGACATCGTCCATGACTTCAAAAGCAGGCTGACAGCCTACCTGGACCTGAGCCTGAACAAGTGCTACGTCATCCCCCTCAACACCTCCATCGTCATGCCCCCCAAAGACTTGCTGGAGCTGCTCATCAACATCAAGgCTGGTACCTACCTTCCCCAGTCCTACCTGGTccatgagcagatgatggtgacTGAGCGTCTGGAGAACGTTGACCAGCTGGGATACTTCATCTACAGCCTCTGCAAGGGCAGAGACACCTACAAGCTGGAACGCAGAGAGACCATACTGGGCAGAGAGAAGCGTGAAGCCCTGAACTGCAGGACGATCCGTCACTTTGAGAGCAAGTTTGTGGTCGAGACAATCATCTGTGAGCCTTAAAGTGAAAGGGGACTGGCTGCTTCAGACAATCCATGTATAGTTTCACTCACTGTCTGCAGTGAGATTtttaacccttctctctctcccatatcaCCCCTCATAGATCCTTTACTCTTCTGTACTGCTGGTAGTTTTGAGAGTTGTCAAATTTAAGTCCAGATGATTCCAAGTCAATACTGTTGTATAAAACTAATGAATTTTTCACTTTGTGTAAAGTACCATTTTCATTTGGGGGCAACTCTTCTCTTCAAAGAATAAGATATGTGTTCAGCTTTTCTTTACTCTGGGGTTTATTATTGTTAGTGTTTAAACGGACACTTAAGTCAGTTAATTACACTTATCAGGTATAACTAGATTGATGAAATATAAACTCAATGAGAATATGCTTACTTTAGCATAGAAAATGAATGATTTTTGTATCTGCTGTCACAAGTACAGTGGGATGAAACAAGAGGAATCTCATACCCCACAGGTCCGTCTGAAAACAGAGCACGTGGTAACTAACATGTTAATATAGTCTGTAAAAAGGAAGATTAATACCACAATAAATCTTAATCGTTT

Function

NR:

description
integral membrane protein 2B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571393.2 True 1455 mRNA 0.47 6 24167580 24175983

Neighbor

gene id symbol gene type direction distance location
LOC110495873 LOC106575174 coding downstream 95221 24043236 ~ 24072359 (-)
LOC110495872 LOC106574245 coding downstream 164655 23999571 ~ 24002925 (-)
LOC110495870 LOC106574243 coding downstream 176678 23974941 ~ 23990902 (-)
LOC110495869 LOC106575170 coding downstream 196266 23948724 ~ 23971314 (-)
LOC110495867 LOC106574242 coding downstream 219509 23918728 ~ 23948071 (-)
LOC110495883 LOC106575186 coding upstream 31361 24207344 ~ 24209455 (-)
LOC118941245 NA coding upstream 50287 24226270 ~ 24226399 (-)
LOC110497104 LOC106574262 coding upstream 104164 24279738 ~ 24371432 (-)
LOC110495886 LOC106575190 coding upstream 277247 24453230 ~ 24465553 (-)
LOC110495885 LOC106575192 coding upstream 302332 24478315 ~ 24519903 (-)
G1529453 NA non-coding downstream 53811 24111695 ~ 24113769 (-)
G1529451 NA non-coding downstream 57977 24109363 ~ 24109603 (-)
G1529449 NA non-coding downstream 59483 24105126 ~ 24108097 (-)
G1529438 NA non-coding downstream 81111 24086203 ~ 24086469 (-)
G1529437 NA non-coding downstream 85180 24082167 ~ 24082400 (-)
G1529493 LOC106517624 non-coding upstream 36625 24212608 ~ 24213494 (-)
G1529494 LOC106574258 non-coding upstream 39818 24215801 ~ 24217224 (-)
G1529492 NA non-coding upstream 41829 24217812 ~ 24263095 (-)
G1529491 LOC106575185 non-coding upstream 42880 24218863 ~ 24221089 (-)
G1529530 NA non-coding upstream 91339 24267322 ~ 24267542 (-)
LOC110495852 LOC106574460 other downstream 624087 23542411 ~ 23543631 (-)
LOC110495851 LOC106574449 other downstream 626324 23479558 ~ 23541681 (-)
LOC110495841 LOC106574435 other downstream 998989 23008547 ~ 23168591 (-)
G1528018 NA other downstream 1281747 22872045 ~ 22885833 (-)
G1527230 NA other downstream 1905118 22262056 ~ 22262462 (-)
G1529613 NA other upstream 217392 24393375 ~ 24393684 (-)
G1530967 LOC106574270 other upstream 974085 25150068 ~ 25150994 (-)
G1531142 NA other upstream 1343438 25519421 ~ 25523180 (-)
LOC110495915 NA other upstream 1397455 25571910 ~ 25574981 (-)

Expression


Co-expression Network