LOC110495915


Basic Information

Item Value
gene id LOC110495915
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 25571910 ~ 25574981 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952420.1
ctatagtttgttaacaagaaaaacaagttttaatgactccaacctaagtgtatgttaacttccgatttcaactgtatctctctctctgacttcccAAACTGTTAAAAAATAAAGATTGGGTTAAATTTATTTATGTGTTCAAATTGTAAATATTTCTGTTTGCTATCTAAATCATGTTAACTACATGACTATGATGCAATTAAGAAAAGATGGAACATCAGAATTGCATTTCACGCTACATCACTTATGACATCACAAATGAGTTAGTTCCGGGAATTTAAGTACATGACAGCTGTTCATTCACCTGTCATTCTGTGTTCTTGAGCTAGCTTCAATACGTGGGAATTAGGTCCAAAATCTCCAAAATGAATTCTTTGTATGTTGGTGACCTCCACCAAAATGTCACCGAGGCAGACCTAAACGAGATGTTTAGTGAGGCTGGACCAATCTTTTCTGTTCGTGTATGTAGGGATCGGGATACACATCGTTCCCTCGGGTACGCCTACGTTAACTTTTATCAGCAAGACGATGCTGATCGTGCCCTGCTCATGTTCAGCAATGATGTGCTTGAAGGAAGATATCTGCGCATCATGAGGTCTGATCCTGACTGTACCCTGAGGAAGAGTGGGGTGGGAAACATCTTAATCAAGAACCTGGACAAGAAGTCTATAACAAACAAAAACCTGTACGAGACCTTCTCAGCATTTGGAGACATCTACTCTAGCAAGGTAGTTTGTGACGAGAATGGCCATTCCAAAGGTTATGGTTATATTCAGTACAAGACCCAGGAGGCTGCTGATAGAGCCATCGAGAAATTAAATGGCATGTTAATGGATAACGAAAAAGTGTTTATCGAGCACTTTAAGTCACGCAAAGAGCGAGAGGAGGTGCTTGGAGCCAAGGCCAGAGAGTTCAACAACGTGTTTGTCAAGAACCTTGGCAGAGATATGAACGATGAAAAACTGATTGAGCTTTTTGGAAAATATGGACCAACCGTTAGTGTCAAGGTTATGAAAGACGATAACGGGAAGTCGTGTGGGTTCGGTTTTGTTTGCTTCGAGAGGCATGAGGATGCACAGAGAGCCGTGAACGAGATGAACAGGAAGGAGCTAAACGGGAGGCTGATATATGTAGGCCGCGCACAGAAGAAAGCCGAGCGCCAGACGTTGCTGAAACTCAAGTTTGGGCAGAAGAAGCCTGACCCCAAGGCCAAATACAGAGGTGTAAATCTCTTTGTAAAGAACCTGGATGATGCCTTTGATGATCACCGTTTAAGGAAGGAGTTTTCTGCATTCGGAACAATCATCAGCGCCAAGGTGATGACGGAGAGCGGGTGCAGCAAAGGCTTTGGCTttgtttccctctcctccccagagGAGGCCACCAAGGCTGTGACGGAGATGAATGGCCGTATTGTGGGAACCAAGCCGCTTTACGTGGCCCTGGCTCAGAGCAAGGAACAGCGGCAACAATACCTGGCAGACCGGTACAAGCAGAGGATGGTCAGTGTCATGGCAGTGCCCAACCCCATCATCAACTCCTACCAGCCTCCTATTCCACAGGTAAATCCATGCAGAAAATCATATATCCAACTTGGACATGAGTAATGAACATTTTATTGAGAAATGCTAACTTCGAATTCCATATAGCCTTTTACTCCAATGTGCACATTCCACAGGCCCAGTCCCATGCAGCTGCCTACTACTTCAGCAACCAACTGGTTCAGCTGAGTTCCAGCCCTGGCATGATGACCGTTGAGCGGATAGCAACTCAGGCCTTGGGCCAGCGCCCACATCATCCTGCCAGTGCAGATGCAGCCACTGCCATGAGCAAGCCTCAGTACAAGTATATGTGATATAATTAAATGTGCCTTTAATAAATACATAAGTACAGTAACATAAAGTGTACCAGCAATCAATATGCTCATCATTCATGTGTGAGCTGTGAGCTGTATTGATGTCTAAGCAGTTTGATTGTTGATGTTTAGGTATTCCTATATGTGGAACATACAGCCAGCTTCTCATTCATGAACAAACGTGACTGAAGCAAGCTTGGTTGTGCTCGTGAATAATTTCTCATATTTTCTCCCTTTCAGGAATTCAACATTCGCAGCTGGCGATGGCTTATGCAATAACTCTCTGCTCCCCACGGCAGTCCATATTAAAGTCCAGGAGCCTCACCAAACTAAAGCCGGACAGAAATCTGTCCCAAACACTGGAGCTTGAAGCCAAGAGAGGAACAGGGTCCTTCAAACTTCCTTTacagaagaagaaagaaaaatttaaacaaaattatattttacagtaaaggcccagtgcagtcaaaattatGTTTCCTGTGTTTTGTGTCATataacagctgatgaaactaagactGTAAAAGTATGAAATATATTTAGCAGTGTTATTTCCTAATAGTTGCTGGTtaaaaatacaatctacacaggaccttgtAATCAGCAAGTTTTGTATGGGTGGAGTTgtagcctgcctggtgacatcaccaggctgcATAAGTTAGTataccaataacaaagagagttccaaacctagctagttttcaggttacaTATCACTCCCACTAAGCCCCTCCAATTAGGTccctcactcagaccactcccagacagtcccaaaaaaagctattttggattatttttgacaattttattGGAAAACTGTTACAGTAAGGTTTAATTGTCACGCAGAAATGATTTAATATTAAGATGAAAACGGCTGCATatggacaacaaaaaaaatcatgtCATAAGATAAGCTAGACCTTGAAAGACACAAGGGTCATTTTAGGTCTGGAAAAAATGTGAATATGAGTTTCCTttgtttgacttttttttttactgtgtttgtgtgtagcagACATGAGTCGTGCTCATGGTTGATCATGGTCTCGTGATGGGGAAGCCATGCCTGCGACTTGGCTAAAGGGAGTTTCCTCTTGGTCTAATGGATATGATGGTGTTGTTGCTCAGCACCCTGTAGACACTTGTGTACTCCATGCCCATGTTCTCCACCAGCTTACAGCACCGCTCCACGATCAGAGGGACAAactggggga
>TU1752958
GCCAAGGTGATGACGGAGAGCGGGTGCAGCAAAGGCTTTGGCTttgtttccctctcctccccagagGAGGCCACCAAGGCTGTGACGGAGATGAATGGCCGTATTGTGGGAACCAAGCCGCTTTACGTGGCCCTGGCTCAGAGCAAGGAACAGCGGCAACAATACCTGGCAGACCGGTACAAGCAGAGGATGGTCAGTGTCATGGCAGTGCCCAACCCCATCATCAACTCCTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952420.1 False 3072 mRNA 0.43 1 25571910 25574981
TU1752958 True 234 TUCP 0.58 1 25573438 25573671
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110495912 LOC106575218 coding downstream 41334 25504882 ~ 25530613 (-)
LOC110495911 LOC106574287 coding downstream 73259 25491518 ~ 25498651 (-)
LOC110495910 LOC106574285 coding downstream 97161 25453741 ~ 25474749 (-)
LOC110496923 LOC106575216 coding downstream 131563 25437923 ~ 25440347 (-)
stat1-1 stat1-1 coding downstream 144827 25410400 ~ 25427083 (-)
LOC110495914 ahr2d coding upstream 59844 25634825 ~ 25717780 (-)
LOC110495917 NA coding upstream 169392 25744373 ~ 25770731 (-)
LOC110495918 LOC106574290 coding upstream 199685 25774666 ~ 25808289 (-)
s100b LOC106574292 coding upstream 263523 25838504 ~ 25840385 (-)
aox5 LOC106574294 coding upstream 360296 25935277 ~ 25961629 (-)
G1531165 NA non-coding downstream 11397 25560157 ~ 25560513 (-)
G1531145 NA non-coding downstream 46725 25521396 ~ 25525185 (-)
G1531134 NA non-coding downstream 83002 25488696 ~ 25488908 (-)
G1531132 NA non-coding downstream 83860 25487820 ~ 25488050 (-)
G1531206 NA non-coding upstream 41415 25616396 ~ 25616717 (-)
G1531208 NA non-coding upstream 44846 25619827 ~ 25620026 (-)
G1531240 NA non-coding upstream 143044 25718025 ~ 25718336 (-)
G1531224 NA non-coding upstream 160468 25735449 ~ 25736981 (-)
G1531266 NA non-coding upstream 197327 25772308 ~ 25772523 (-)
G1531142 NA other downstream 48730 25519421 ~ 25523180 (-)
G1530967 LOC106574270 other downstream 420916 25150068 ~ 25150994 (-)
G1529613 NA other downstream 1178226 24393375 ~ 24393684 (-)
LOC110497104 LOC106574262 other downstream 1287916 24279738 ~ 24371432 (-)
LOC110495852 LOC106574460 other downstream 2028417 23542411 ~ 23543631 (-)
G1531236 NA other upstream 121558 25696539 ~ 25708874 (-)
G1533378 NA other upstream 1612641 27187622 ~ 27189549 (-)
LOC110495948 LOC106574314 other upstream 2179193 27754174 ~ 27798978 (-)
LOC110496785 LOC106574363 other upstream 2286065 27839770 ~ 27914607 (-)
LOC110495955 LOC106574324 other upstream 2459983 27995381 ~ 28092196 (-)

Expression

LOC110495915 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 0.2.
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LOC110495915 Expression in each Bioproject

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LOC110495915 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 8.
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Co-expression Network