LOC110495935 (fstl1)


Basic Information

Item Value
gene id LOC110495935
gene name fstl1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 27158978 ~ 27185448 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571467.2
CTATTGGCCAagtcagagaggggggagacagacgaGGGAAATTCCTTCGTGGTGCTCAAATTTCGCCAATCTAATTTTCCTATCCTCCTTTGTCTCGGTCTGAACACTGACGTCTCTCCTCTGCCTTTGAGTCATCACCCGCTAACATGATGTTTCGAAGTGCCCTTTTATGTCTACTAGTCGCAGTCGTTTGCTGTCATGCCGAGGAGGGGAAGAGCAAGTCCAAGGTGTGTGCCAATGTATTCTGTGGGGCTGGCAGGGAGTGTGCTGTGACAGAGAAAGGGGAACCTTCCTGCCTGTGCATCGAGcaATGCAAACCTCACAAGCGCTCTGTGTGTGGCAGTAATGGTAAGACGTACCGCAACCACTGTGAGCTCCACCGCGACGCCTGCCTGACCGGCCTCAAGATCCAGGTGTACCACGACGGACACTGTGAAGagaaaaagacagacaaAGCTGTTGCTGCTAGCCCAATCGTGTGCTACCTGGCCAACAGGAACGAGTTGCGCAGCCGGGTCATCCAGTGGCTGCAGAATGAGGTGGTCCCTGACGGCTGGTTCGCCAAGGGCTCCAACTTCTCCGACACCCTGCTCAAGTACTTCAAGGACTATGACAATGGAGACTCCCAGCTGGATTCCACTGAGTTCCTTAAGTTCCTCCAGCACAACGAAACAGCCATCAACATTACCTCATATGCTGACGAGGAGAACAACCGCCTGCTCAGGAGCCTGTGTGTGGATGCCCTCATCGAGCTCTCAGATGAGAACACGGACTGGAAGTTGAGCTTCGATGAGTTCCTAAACTGCTTCAAGCCTGGCTTCAACCCACCAGAGAGAAAGTGTGCCCTGGAGGATGAGACCTATGAggacggggccgagactcaggtggaatgtAACcgctgtgtctgtgcctgtgggAACTGGGTCTGCACAGCTGTGACCTGCGAAGgCACAGATAAGATGCCTGCTGTGGAGAAGACTGAAGGTGCTGACCAGGAGATGACAGAGGAGGAGTGGACACGGAGAGTGGCTGAGCTCAACAAACATCAGGAAACTGTGGAGAAGATGAAAGTGAGCACTAAGGacatttaagagagagagagagagagagagccctcctTCAGTCCCACCATCAACAATCACTATCTGGCTGAGGCTTTGGAGCTTGTACTGTTGCTAAAGAAATGCATCACTTGTGTTTAGTTTTTATATTTTACAATGTGAAttattgagattttttttttaaatgtaccaatgtctattataatattattgtGTATAGGGGAGACTAGTTGAATTGTGTGTACCTACAAACACAGTACTGTTATCCTATTTGAGTAACACTCCCAAGCCTTGGTAAAAATCCCCATCACCTAGTGGTGGGTtaatatttgtattcattttaGTTCATTTGTTGTTTTCGTTGTTGTTTCTGTCAGTCAAATTAGCTCATctgtagagaagagaagagtgtGGGAATTGGAGCTATAAAGAAAGCACAGTTGTAAAGAACTACTTTTCGCAGAAAATGACTTCACAGTTGCCACGACACACACCAACCACATCACAGAGGACAAGCGATTCGGCGAGAAAGCCTTATCAGATGCATTGACCTTACAGGGTGCTATTCCAGACACCTGAGTATTTTACAGGGCCAGTAAATCACATGAAAGATGAACACATGGCTCAGTTGTAAATGTACCTGAATACCATTGTAAATCCATCAACAGTGTGATTACACTTTCCTGGCAGTATAACTACTCATATCATATCTGTGATATATACAGTAAAACCCACTGACCCATAACATCTGATGGTGCCAGGGTTCAATCTGTTAGGAAAAGGAAAATGAAGAGTGTCCGCACTCAGTCTTAGACAAGAACATGTATTCCATCTCTATTTTCTTGTCTATGCACCAACAATATGACAATAATCTATGATTAGATGTGTGCAGGGTTTCCTGCTTTTTCAAGGTAAAGTGATGATTCTAGGGTTCAATCTGTAGGCTACATGTCTACACTGATGAGGTAATGCTGTCCATCTATTTACAAATGGCTTTTCTATCATAGGGTTGTAGAGTTATTACACCATAAAATGAATCTAATGCCAAAACACTAGCCTGGATACTTGTTCGGATTGTGAAGTGAAACTGAAGAATTCAGTATGGATCCAggctaccaaaacacacagatgGTAGTGACAGTACTGTATTGCTAGGAGAGTTTGTGATAACGCCTGTGTCTCCTCAAACCCAGCAAAAAAGATGATCAATTGTAGAATGTTCAGGGGGAAATATTTCAAGGATGCTGCAGATATGGACTAACTAATAGTACTAAAAGTACTTAATAACACAAGTACTCCAGTGCTATGGGTCCCTCCTACTAGTTTGAAATACACAATTGTCTGGTCCGTCTGAGACATACATAATCTGTGCATGCTTTGCCAACAGTACTGCAATCCGTTTCTTTTGGAAGCTGACGCATGTCGGTCTCTCAGGATATAGGTGCTTTGATGGGATGACTTTGTTAGGCACAAGGATTGGGAAAAACTGCCAAAACAACCTCTAGAAAACATTTTAGATTGCATTACTTAAACCAAAGTTCAAATGCAAGATACCTGAAGTACAGTATGTGTAGTAACTTTTAGAAAATAGGTTCACAGCCTAGACTCGAGCTTTCCTTTCTTTGTTCAGAGCTGTATGTCCTGCATGTCAATATTTGAATGTGGTGGATCTCACTTCAATGTCTTTATAATGTGTGGTATTCAGTGCCTTAAATGTTCACTAAGACCTATGGGACATCCTGCTGTCGTTCTCTTAGAGCAATGGCTGTCACTATGAAACCATGCCAAATGGATGGTCTAATTGAAGTTAAAAGCCTGTGTTTCTTTTGTTTGTAATGATTTATTGTCTCACTTTTAGAATAATACCAGCTCGCGTTGTTCGCTGTTACAGTAGacttttaataaaacatttactcCCTGTTGATTATTAACACTACTGTACCGTCAAAAAGGTATGCAAGCTTTATACAtgtcaataaatacatttaatagaCGTAA

Function

symbol description
fstl1 Predicted to enable calcium ion binding activity and heparin binding activity. Predicted to be involved in several processes, including endothelial cell differentiation; endothelial cell migration; and regulation of BMP signaling pathway. Predicted to act upstream of or within hematopoietic stem cell homeostasis. Located in extracellular exosome.

NR:

description
follistatin-related protein 1-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K23912 FSTL1; follistatin-related protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571467.2 True 3059 mRNA 0.44 11 27158978 27185448

Neighbor

gene id symbol gene type direction distance location
LOC110495934 LOC106574305 coding downstream 2691 27152195 ~ 27156287 (-)
LOC110495932 LOC106574304 coding downstream 18491 27096980 ~ 27140487 (-)
LOC110495931 LOC106574302 coding downstream 75901 27065029 ~ 27083077 (-)
LOC110495928 LOC106574300 coding downstream 566783 26513620 ~ 26592195 (-)
lrp1ba LOC106574298 coding downstream 948599 26046428 ~ 26210379 (-)
LOC110495936 LOC106574306 coding upstream 29618 27215066 ~ 27219473 (-)
LOC110495938 LOC106574308 coding upstream 72038 27257486 ~ 27364364 (-)
LOC110495941 LOC100196748 coding upstream 203261 27388709 ~ 27395340 (-)
LOC118941127 NA coding upstream 338411 27523859 ~ 27526447 (-)
LOC110495945 LOC106574379 coding upstream 388083 27573531 ~ 27607434 (-)
G1533288 NA non-coding downstream 43752 27035775 ~ 27115226 (-)
G1533235 NA non-coding downstream 126276 27027800 ~ 27032702 (-)
G1532505 NA non-coding downstream 265316 26893415 ~ 26893662 (-)
G1532504 NA non-coding downstream 265698 26892971 ~ 26893280 (-)
G1532468 NA non-coding downstream 291866 26866821 ~ 26867112 (-)
G1533380 NA non-coding upstream 4174 27189622 ~ 27189973 (-)
G1533383 NA non-coding upstream 7710 27193158 ~ 27193378 (-)
G1533387 NA non-coding upstream 10387 27195835 ~ 27196116 (-)
G1533388 NA non-coding upstream 11155 27196603 ~ 27207572 (-)
G1533415 NA non-coding upstream 55162 27240610 ~ 27240818 (-)
G1531236 NA other downstream 1450104 25696539 ~ 25708874 (-)
LOC110495915 NA other downstream 1585307 25571910 ~ 25574981 (-)
G1531142 NA other downstream 1635798 25519421 ~ 25523180 (-)
G1530967 LOC106574270 other downstream 2007984 25150068 ~ 25150994 (-)
G1529613 NA other downstream 2765294 24393375 ~ 24393684 (-)
G1533378 NA other upstream 2174 27187622 ~ 27189549 (-)
LOC110495948 LOC106574314 other upstream 568726 27754174 ~ 27798978 (-)
LOC110496785 LOC106574363 other upstream 675598 27839770 ~ 27914607 (-)
LOC110495955 LOC106574324 other upstream 849516 27995381 ~ 28092196 (-)
LOC110495963 LOC106574327 other upstream 1165930 28241494 ~ 28368147 (-)

Expression


Co-expression Network