cpb2 (cpb2)


Basic Information

Item Value
gene id cpb2
gene name cpb2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 27808174 ~ 27819821 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571501.2
acagatctctctctctctctctctctctctctctctcatgttaaCCAAACATCTTGCATAAGTTTTGGACACATTAAACATGAAGGCTCTTCTAATATGGGCTGTTTTACTGAACTTTTACAAGCTCCCTAAGACGGGTGACTGCGCTTCAACACATGACCAAGTTCTCTCAATCCAAGTCACAACACATCAACAAGCAGATATTGTGAAGAACATATCCAGCCAATATGAGACAGTTTTGTGGTCACCTACTTCACCTGAGTACATCGGAGCACACACTGAGGTGCACCTGTTTGTTCCTGCCAACAAATTGGGGACTGTCACAGACCTGCTGCAGACACACCACCTAACACACCAagtgctactggacaacacagaggaacTGATCGAGATGCAGACCAGGAATGAATCGTCGGACCCTAGAAGCAGTGCATCTTATTATGAGAGATACCATTCTCTGGAGGACATCTACTATTGGATCAACAAGACTGCCCAGGACTACCCAGACATGGTCAAAGTCACCCTGATTGGCTCATCATATGAAAAACGCCCACTTTACGTTCTCAAGTTGTCTGGACGACAAGAGAGAGCTGAAAAGAGAGCAATATGGATTGACTGTGGCATTCATGCTAGAGAGTGGATCTCCCCAGCTTTCTGCCTGTGGTTTGTGCAATATTCCTTGAACTTCTATAATCTAAACAATGACATCACTGAGATGCTGAACAGTATGGACATCTATGTGCTGCCTGTCATGAACCCGGATGGATACAAGTACACATGGACAACGAACCGAATGTGGAGAAAGAATCGTTCCATGAGCAAGGAAAGCAACTGTGTTGGAACCGACCTCAATAGAAACTTTGACGCAAACTGGTGCACAAAGGGAGCCTCCAACAGGCCCTGTGATGAGATATACTGCGGCCAGTTCCCAGAGTCGGAGCCTGAGGCAGAAGCCGTGGCTAACTTCTTGCGCAGCCACAAAGACTCAGTAAAgctctatctctccatccattcCTATGGTCAGATGCTGCTCTTCCCATACTCCTGCTCCAATGAGGAGGTGCCTAACCACGCCGAGTTGtttGAGCTTGTACAGGAGGCAGCCATGAAAGTCAGAAGATACTACAGGAACAACTACAAATACGGCGCATCAGCAAAAACAATATACTTAGCTCCTGGAGGTTCTGACGACTGGGCCTACAACCTGGGCATCCACTACTCCTTCACTTTTGAGCTGGAGGACCGTGGTCGATATGGTTTCCTCCTACCGCCATCATTAATCTCCAAGGCCTGCAATGAAGCCCTCCTCGCTCTTAAGAGTATCGCTCTCAGAGTCATTCAGAaaacacaaccccaaccctaacacgGAACGtgtgtgcgccatcgtgcataaatgtattttgtccccccacaccaaacgctatcacgacacacaggttaaaatatcaaaacaaactctgaaccattgatattaatttgggaacaggtcgaaagcattaaacatgtatggcaatttagctagctagcttgcacttactagttaatttgtcctatttagctagcttgctgttgctaccTAATTTGTCctaggatataaacattgagttgttattttacctgaaatgcacaaggtcctctactccgccaattaatccacacataaaacggtcaaccgaatcgtttctagtcatttctacaccttccaggccttttcttctcttgactttataatgcgattggcaactttcataaattaggtgcattaccgccactgacctcgttcgtctttcagtcacccacgtgggtatcaccaatgaggagatggcacgtgggtacctgcttctataaaccaatgaggagatgggagaggcaggacttgcagcgcgatctgcgtcagaaatagaactgacttctattttagcccttggcaacgcagacgctcgttggcgggcgcgagcagtgtgtgtgcaataattgaataacatggatttctacatttattttgcaacgctggCGCACGCAACGAGAGCAGTGTAGTCAGCCTGCAACCCTTTATGCCCCTGAGAAGTTGTCTGTGAAAACCTGAGCAGTTTCACATCTGATTTTGTCCAAAGTAATCCCTTTTATCAAAGTATGttttgtgtgcgtgtctgtcaaACATGATTGTAAATTGTATCATCATTTTGTGTTTTTAAGGAGTAGGGCAGTCCCAATCATGACATAATGAGTTGTttgttggaggagaggagagacgggggagagagtgCTGAAATAGCAATGGGTCTGATGTGAACCCATGCAGCTGCAAGTGGTGTTCCATGGGCAGCGTCTTAGACCGCTAGGCCAGCCTAGTGTCACCCTAGCACAGCATTCATGTTTTTGTAGTAAGAAATCATAGACACTTTGTTTTATTCCAACTGTATATCCTCCTACAGCTTTGAAGCTTAAAACTATAATTGTGTTGACAGTTCTCTGTGTGTAGGCTTCTAATGGTGTAACAAGATGAATATTCCAACAGAAAACAATAATGAAATTAGATATTTAAATGTTGATGTTTTGGCC

Function

symbol description
cpb2 Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in fibrinolysis and proteolysis. Predicted to be active in extracellular space. Is expressed in liver. Human ortholog(s) of this gene implicated in chronic kidney disease. Orthologous to human CPB2 (carboxypeptidase B2).

NR:

description
carboxypeptidase B2-like

GO: NA

KEGG:

id description
K01300 CPB2; carboxypeptidase B2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571501.2 True 2562 mRNA 0.45 11 27808174 27819821

Neighbor

gene id symbol gene type direction distance location
LOC110495948 LOC106574314 coding downstream 9196 27754174 ~ 27798978 (-)
LOC110495945 LOC106574379 coding downstream 200740 27573531 ~ 27607434 (-)
LOC118941127 NA coding downstream 281727 27523859 ~ 27526447 (-)
LOC110495941 LOC100196748 coding downstream 412834 27388709 ~ 27395340 (-)
LOC110495938 LOC106574308 coding downstream 443810 27257486 ~ 27364364 (-)
LOC110496785 LOC106574363 coding upstream 19949 27839770 ~ 27914607 (-)
LOC110495957 LOC106574318 coding upstream 128957 27948778 ~ 27974405 (-)
prkag3a LOC106575098 coding upstream 154987 27974808 ~ 27982705 (-)
LOC110495959 LOC106574321 coding upstream 165645 27985466 ~ 27995296 (-)
LOC110495955 LOC106574324 coding upstream 175560 27995381 ~ 28092196 (-)
G1533722 NA non-coding downstream 95182 27712586 ~ 27712992 (-)
G1533686 NA non-coding downstream 148897 27658996 ~ 27659277 (-)
G1533685 NA non-coding downstream 149432 27658542 ~ 27658742 (-)
G1533680 NA non-coding downstream 153115 27654810 ~ 27655059 (-)
G1533679 NA non-coding downstream 153652 27654212 ~ 27654522 (-)
G1533783 NA non-coding upstream 11152 27830973 ~ 27833037 (-)
G1533845 NA non-coding upstream 106471 27926292 ~ 27926680 (-)
G1533860 NA non-coding upstream 125848 27945669 ~ 27945957 (-)
LOC110495961 LOC106574325 non-coding upstream 304791 28124599 ~ 28199758 (-)
G1533378 NA other downstream 618625 27187622 ~ 27189549 (-)
G1531236 NA other downstream 2099300 25696539 ~ 25708874 (-)
LOC110495915 NA other downstream 2234503 25571910 ~ 25574981 (-)
G1531142 NA other downstream 2284994 25519421 ~ 25523180 (-)
LOC110495963 LOC106574327 other upstream 531557 28241494 ~ 28368147 (-)
G1536703 NA other upstream 2464551 30284372 ~ 30284762 (-)
G1537022 NA other upstream 2700071 30519892 ~ 30525373 (-)

Expression

cpb2(cpb2) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 400.
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cpb2(cpb2) Expression in each Bioproject

Bar chart with 21 bars.
cpb2(cpb2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15000.
End of interactive chart.

Co-expression Network