alg11 (alg11)


Basic Information

Item Value
gene id alg11
gene name alg11
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 27820568 ~ 27829342 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571497.2
GCTCTCACCGAGGTATAATAAGAACGGACGCGCTAACCTCAAATAAAAACCAATAGTGAACTCGCAGCACAAACATTTCCGGTTTGGAGGTTGTGTTGTCAAGATGTCTGTCCATGATCAACTTGCTCAATGTTTGTGTGATCTAATCAgGTTGTTGTGGACATTGCTTCTGCCATGCGTGTTTCTGTGCATGCTCCTGACCGCCACCCTGGTCGTGCTTGTCATGGGGGTGCGCGTGTGGCTGCAGGCAAACAGGAACGCACGGCGAGCGCGTGATGGGCGTCCCACGGTGGCTTTCTTTCACCCGTACTGCAACGCGGGAGGTGGTGGTGAGAGAGTGCTGTGGTGTGCCCTCAGAGCTTTGCAGAATAGGTACCAAGATGTCAACTTCATGGTGTACACGGGCGACCAGGGTGTGACGAACCAGCAGATTCTTGATGGCGCCCGGCGGCGCTTCAACATCCTTTTACCTCGACCCGTCCAGTTTGTCTTCCTCAAACACCGCCTGTTGGTCGAGGCCAGCCTCTTCCCCCACTTCACTCTGATTGGTCAAAGTGTAGGCTCAATCTTCCTTGGTTGGGAAGCCCTTACGGAGTTTGTCCCAGATGTCTACATCGACTCCATGGGTTACGCCTTCACTCTGCCTGTGTTTAAATACCTAGGGGGTTGTCACGTGGCTAGCTACGTGCACTACCCCACCATCAGCACAGACATGCTGTCGGTGGTGCGCGAGAGGAACCCCAGGTTCAACAACGCAGACTACATCTCCAACAACCTGTTCCTGAGCGCGGTCAAGGTTGTCTACTACTGCCTGCTGGCGCTGCTCTATGGTCTGGCCGGCTCCTGCAGCGACGTGGTCATGGTCAACTCCAGCTGGACCCTGAACCACATCCTGACCCTATGGCGAGCGACCAACCGCACCTGCCTAGTCTTCCCGCCCTGCGACACCCGCGCCTTCCTCCAGCTCCCGTTGGACGAGGACTCGGACCGGAAGTGCCATTCCATCGTTTCCATTGGTCAGTTTCGACCGGAGAAGGACCATCGGCTTCAGATTCGCGCCTTCCGGAAGGTGCTGCAGAAGAAAGAAGCGGGGCTAGTTGCGGGGCCGGGAGGAAGGGAGTCGCTGAGGTTGGTGCTGATTGGTGGATGCCGGAACCAAGAGGATGAGGATAGGGTGTTGATGCTGAGAGGTCTGTGCCAGGAGCTGGGCGTGGCGGACAGGGTGGAGTTTAAACTCAACGTGCCGTTTGAGGAGCTGAAGAGGGAGTTGGGGGAAGCTACGGTGGGACTGCACACCATGTGGAACGAACACTTCGGGATAGGGGTGGTGGAGTGCATGGCGGCTGGGACCGTCGTCCTGGCCCACAAGTCTGGAGGCCCCAGGCTGGACATTGTGGTGCCCTACGAGGGCCGCCAGACGGGCTTCCTGGCCGAGGATGAGGACGGCTACGCAGACGCCATTGAGCGCATCCTGGCCCTGTCACCCTCGGCCCGCCTGGAGATCCGACGCAACGCCCGCCTCTCGGTCACCCGCTTCTCCGACCAGGAGTTTGAGGCCTGCTTCCTGGCCGCCATGGAGCCTCTCATGGGGACACTGGAGCGATGAGGGGGGGTGGGTGGAAGTGTGTCACGCTCATGGGTGTGCGCGTGCATGCATACTAGCCATTCTTTTAGTTGACATAGGATACAGTTTGTGTTAAAATGCACCAGGAATACGTTGACTTAAATGAAAGATGTATTTATTGACATGTCAGTCCAGGCGTCCACTCTCTTTCTAGAGGGtcttaaatgttttgtttttgttttgttttcaagACCATTGTATTTTGTACTTGAGGCATAAGATTAGTGCTCGTCTAGCCTCCCAAGTTCCCCGTCTCGATTGTCAACGCGTACAGAGAGCCGGCTGGTAGACTAGATTAGTGCTCGTCTAGCCTCCCAAGTTCCCCGTCTCGATTGTCAACGCGTACAGAGAGCCGGCTGGTAGACTAGATTAGTGCTCGTCTAGCCTCCCAAGTTCCCCGTCTCGATTGTCAACGCGTACAGAGAGCCGGCTGGTAGACTAGATTAGTGCTCGTCTAGCCTCCCAAGTTCCCCGTCTCGATTGTCAACGCGTACAGAGAGCCGGCTGGTAGACTAGATTAGTGCTCGTCTAGCCTCCCAAGTTCCCCGTCTCGATTGTCAACGCGTACAGAGAGCCGGCTGGTAGACTAGATTAGTGCTCGTCTAGCAAGGACTGGACACAACTGATTTTGATGGCATTCCAGGTTGTCTTTTTTTCAGTCAAACTACAAATATCAGAAGATTAAGATAATTAGGTGGGTGCTTACATTTGTATTATTTCACACGTGTGAATTGGAAATTGTTTATATCCCACCCAGTCAGGGATCAGCCGTTATTGACGGCAACCCTGGAGCAGTTGCCTCGCTCACGGGCATGTCAACATatttttttcacctagttggctcgggatttgaaccagcgacctcttactggcccaacgctcctaaccgctaggctacataTAGTGTTTAATGTGGTTCTTGGGATGTGAAACATCTCTAGGCATTGTGAGATCTGATCTCTTGTGTAGTGTGACTACAAAAAAAAGACTACCTGGAATGACAGCAGTATCTGACTGTCTTTGATGATGACCAAACTCTGTTCGCTGACATCAGCGAGAGGGTGGTGATGAGCCTGTAGAGACTAACTTTACAATTCTGATGACTGCTGTGATAATTAACATTGTTACTTAACATTTTTAAATAACTAGAAATGCCGTTCTGTATCCTAAGTaggaagtattttttttttttatattaaaacatttataaaata

Function

symbol description
alg11 Predicted to enable GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity. Predicted to be involved in oligosaccharide-lipid intermediate biosynthetic process and protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ip. Orthologous to human ALG11 (ALG11 alpha-1,2-mannosyltransferase).

NR:

description
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004377 GDP-Man molecular_function

KEGG:

id description
K03844 ALG11; alpha-1,2-mannosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571497.2 True 2838 mRNA 0.52 5 27820568 27829342

Neighbor

gene id symbol gene type direction distance location
LOC110495947 LOC106575089 coding upstream 70508 27629477 ~ 27750060 (+)
LOC118941128 NA coding upstream 253156 27556403 ~ 27567412 (+)
LOC110495944 LOC106574312 coding upstream 272102 27526452 ~ 27548466 (+)
LOC110495943 LOC106574311 coding upstream 300085 27487296 ~ 27520483 (+)
LOC110495942 pknx1 coding upstream 342753 27462439 ~ 27477815 (+)
LOC110495952 NA coding downstream 613 27829955 ~ 27843859 (+)
si:dkey-1h24.6 LOC106574316 coding downstream 96440 27925782 ~ 27931338 (+)
LOC118941047 mdh1b coding downstream 108690 27938032 ~ 27940798 (+)
LOC110495958 LOC106574318 coding downstream 114031 27943362 ~ 27958807 (+)
LOC110496786 NA coding downstream 645007 28474349 ~ 28479668 (+)
G1532920 NA non-coding upstream 9677 27805255 ~ 27810891 (+)
G1532837 NA non-coding upstream 344028 27476281 ~ 27476540 (+)
G1532827 NA non-coding upstream 367627 27452458 ~ 27452941 (+)
G1532803 NA non-coding upstream 435704 27384550 ~ 27384864 (+)
G1532773 NA non-coding upstream 481471 27338834 ~ 27339097 (+)
G1533033 NA non-coding downstream 21122 27850464 ~ 27851051 (+)
G1533099 NA non-coding downstream 92263 27921605 ~ 27923875 (+)
G1532307 NA other upstream 1062891 26757369 ~ 26757677 (+)
LOC110496782 LOC106575224 other upstream 1876890 25930184 ~ 25943678 (+)
G1530923 LOC106574292 other upstream 1980833 25838506 ~ 25840353 (+)
G1530785 NA other upstream 2249222 25566471 ~ 25571346 (+)
G1533121 LOC106574322 other downstream 145471 27974813 ~ 28038476 (+)
LOC110495972 NA other downstream 903433 28732589 ~ 28735229 (+)
G1534488 LOC106574337 other downstream 974686 28804028 ~ 28804673 (+)
G1534495 NA other downstream 983487 28812829 ~ 28813103 (+)

Expression


Co-expression Network