Item | Value |
---|---|
gene id | LOC110496785 |
gene name | LOC106574363 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048582.1 |
NCBI id | CM023236.2 |
chromosome length | 74657750 |
location | 27839770 ~ 27914607 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036952461.1 | False | 4350 | mRNA | 0.61 | 16 | 27839770 | 27914605 |
XM_036952462.1 | False | 4275 | mRNA | 0.61 | 15 | 27839770 | 27914605 |
XM_036952458.1 | False | 4441 | mRNA | 0.61 | 17 | 27839770 | 27914606 |
XM_036952460.1 | False | 4366 | mRNA | 0.61 | 16 | 27839770 | 27914606 |
XM_036952459.1 | False | 4357 | mRNA | 0.61 | 16 | 27839770 | 27914607 |
TU1755806 | True | 704 | TUCP | 0.50 | 5 | 27861046 | 27914520 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
cpb2 | cpb2 | coding | downstream | 19949 | 27808174 ~ 27819821 (-) |
LOC110495948 | LOC106574314 | coding | downstream | 40792 | 27754174 ~ 27798978 (-) |
LOC110495945 | LOC106574379 | coding | downstream | 232336 | 27573531 ~ 27607434 (-) |
LOC118941127 | NA | coding | downstream | 313323 | 27523859 ~ 27526447 (-) |
LOC110495941 | LOC100196748 | coding | downstream | 444430 | 27388709 ~ 27395340 (-) |
LOC110495957 | LOC106574318 | coding | upstream | 34171 | 27948778 ~ 27974405 (-) |
prkag3a | LOC106575098 | coding | upstream | 60201 | 27974808 ~ 27982705 (-) |
LOC110495959 | LOC106574321 | coding | upstream | 70859 | 27985466 ~ 27995296 (-) |
LOC110495955 | LOC106574324 | coding | upstream | 80774 | 27995381 ~ 28092196 (-) |
LOC110495961 | LOC106574325 | coding | upstream | 209992 | 28124599 ~ 28199758 (-) |
G1533783 | NA | non-coding | downstream | 6733 | 27830973 ~ 27833037 (-) |
G1533722 | NA | non-coding | downstream | 126778 | 27712586 ~ 27712992 (-) |
G1533686 | NA | non-coding | downstream | 180493 | 27658996 ~ 27659277 (-) |
G1533685 | NA | non-coding | downstream | 181028 | 27658542 ~ 27658742 (-) |
G1533680 | NA | non-coding | downstream | 184711 | 27654810 ~ 27655059 (-) |
G1533845 | NA | non-coding | upstream | 11685 | 27926292 ~ 27926680 (-) |
G1533860 | NA | non-coding | upstream | 31062 | 27945669 ~ 27945957 (-) |
G1534021 | NA | non-coding | upstream | 304567 | 28219174 ~ 28226302 (-) |
G1533378 | NA | other | downstream | 650221 | 27187622 ~ 27189549 (-) |
G1531236 | NA | other | downstream | 2130896 | 25696539 ~ 25708874 (-) |
LOC110495915 | NA | other | downstream | 2266099 | 25571910 ~ 25574981 (-) |
G1531142 | NA | other | downstream | 2316590 | 25519421 ~ 25523180 (-) |
LOC110495963 | LOC106574327 | other | upstream | 436771 | 28241494 ~ 28368147 (-) |
G1536703 | NA | other | upstream | 2369765 | 30284372 ~ 30284762 (-) |
G1537022 | NA | other | upstream | 2605285 | 30519892 ~ 30525373 (-) |
G1537091 | NA | other | upstream | 2688109 | 30602716 ~ 30603392 (-) |