LOC110495976


Basic Information

Item Value
gene id LOC110495976
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 29496293 ~ 29497472 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002469498.2
GGCATGGATCAAAGCTGGAGAGACATTCAATGACGTCATCTTCACAGTCGAACCAACCGTGGCCCGTGAGCAATGTGCTCAACATTGCTACAGAAAATAAGGAAGAAGATGAAGCAAGCCAAGTCCCAAGTATCCGCTCAAACTCCATGTGTGGGTAGCAATTTCTCGCCAGGGACCAGGCCCATATTTGTTTTTTGATGGTATCGTGGCTCGTGATTTCTTTGAGGAACAAATCATCAAGAGATATGCTGGACCCTATGTCAGAGTGGTGTTTCTGGGATCACATCGTTTCTTTCAAGACACTGGCCCAAAACACATTGCCCGGGTTTGCATTACAAATGAGGGCATAAACTGGGTCAAGACGCCAGCGAGTAAGAGTCTCCTgacttaaacctgatcgaacTTGTTTGGCATCAACTGAAAACATTAATCTGTAACTGCTAAGCCGACAAGCAAAGATAAACTGGTCAAGGCCATCAAGATGTTTTGGATAGAGAAATTGACCATACAACAATGCAACAAATACACTGATCATCTCATCAATCATCTCACCTGTGGTCATGGAGCTGGGTGGAGTTGCGACTAAAATCTAGTTTAAATAAACATCTACATTTGAATGTATTTTTTCTcgttattttattaacgaaagcataaagatgttgatgaagaaatactgtactgctgtttAGAGTACTTAAGCATCAAATACATTGCAAGTTGAGGGATTTTCACAATAGTAGCCGGGCTTTAAaaagtatattgtcctgctaataggaaacatttgcatgatgggctacacctgctacagtactaaagtacacttgtgaaaaacaagtgtttgaaaacctgttttca

Function

NR:

description
uncharacterized protein LOC110497097

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002469498.2 True 855 mRNA 0.41 4 29496293 29497472

Neighbor

gene id symbol gene type direction distance location
LOC110496788 gart coding downstream 221560 29253527 ~ 29274733 (-)
LOC110495974 LOC106574337 coding downstream 690938 28771350 ~ 28805355 (-)
LOC110495973 LOC106574336 coding downstream 728230 28760672 ~ 28768063 (-)
LOC110495971 cyyr1 coding downstream 737608 28739018 ~ 28758685 (-)
LOC110495970 app coding downstream 764981 28689122 ~ 28731312 (-)
LOC110495979 LOC106574339 coding upstream 819904 30317376 ~ 30396869 (-)
LOC110496790 lig4 coding upstream 920371 30417843 ~ 30441655 (-)
LOC110495980 irs2 coding upstream 959394 30456866 ~ 30476059 (-)
LOC110496791 cars2 coding upstream 992211 30489683 ~ 30497834 (-)
LOC110515180 NA coding upstream 1000711 30498183 ~ 30502180 (-)
G1535335 NA non-coding downstream 223278 29272703 ~ 29273015 (-)
G1535156 NA non-coding downstream 346611 29149482 ~ 29149682 (-)
G1535062 NA non-coding downstream 409392 29086631 ~ 29086901 (-)
G1535047 NA non-coding downstream 419593 29076211 ~ 29076700 (-)
G1535041 NA non-coding downstream 422467 29073429 ~ 29073826 (-)
G1536211 NA non-coding upstream 405268 29902740 ~ 29902941 (-)
G1536273 NA non-coding upstream 446929 29944401 ~ 29944617 (-)
G1536280 NA non-coding upstream 450576 29948048 ~ 29948327 (-)
G1536299 NA non-coding upstream 462716 29960188 ~ 29960448 (-)
G1536325 NA non-coding upstream 487271 29984743 ~ 29985132 (-)
LOC110495963 LOC106574327 other downstream 1143675 28241494 ~ 28368147 (-)
LOC110495955 LOC106574324 other downstream 1459677 27995381 ~ 28092196 (-)
LOC110496785 LOC106574363 other downstream 1581773 27839770 ~ 27914607 (-)
LOC110495948 LOC106574314 other downstream 1697680 27754174 ~ 27798978 (-)
G1533378 NA other downstream 2306744 27187622 ~ 27189549 (-)
G1536703 NA other upstream 786900 30284372 ~ 30284762 (-)
G1537022 NA other upstream 1022420 30519892 ~ 30525373 (-)
G1537091 NA other upstream 1105244 30602716 ~ 30603392 (-)
LOC110495992 LOC106588166 other upstream 1414355 30911827 ~ 30955199 (-)
LOC110495994 LOC106588168 other upstream 1514406 31008756 ~ 31014201 (-)

Expression


Co-expression Network