LOC110495990 (hax1)


Basic Information

Item Value
gene id LOC110495990
gene name hax1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 30788111 ~ 30802586 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571576.2
AGGCTTTGTCCAAGCGAACCatggagttagtgcctacaaaaatacGCCATTACTATTGTCCTACGGTAAACTGTTCGGTGTGTTCCAAAACCGTCGATTGCTTTATTCTTCAGGGAAGTCTGGCTTTACGGCAGTCTTGAAGTCGTCCTTCGACTAGTTCAGCATGAAGTAGCTACATTTACATCAAACGTTTGATTCAAATGAGCTTATTTGATCTATTTCGTGGATTTTTTGGGGTACCTGGAGGAGGCCATGATCGTGGTGAGGGCCGAAGGGACCCCTTCTTCGATGGCATGACCcacgacgatgatgatgatgatgatgaagaggaggatggaaTCTACTTTGATGGTTCACAGGGTGGTGGTGGCCAGCAGGACCTGTTTGATAATCAGTGGAGGTTTGGGTTCAGCATGGGCCCAAACGGAGTGAGGATCCAGGAGCCTGAGATGTTTGGCCAGTTCTTCAGAGAGATGGAGATCTTCTCACAACTAGGGCGATACGATGGTCAGTTTGGAGTAGGACAGTTTGGTGTTACCAGTATTGAGGCGCCCCTTTCCCAGGACAGGTCAGAGAAAGGTGGGGGAGGATCCAGTGGAAACTCCTTGAGGGACTTCATGTTGAAAGGCCCCAATGACTGCCCGTGTGGGTCGACTGGGCTACCCTCAGGACCATCAGAAGGCCCCAGAGTCGATAAGAACCCTCCATCTGGTGGCCCATGCTTCCCCAACACACCCTTTGATTACTGGACACCCTTTTCTAAGTTCAATGATAGTTGGAGAGGAAGGCTACAAAGGGGTCAAAAGCAGGAGCCGAAAGCAGACAGAGATCTGGACTCGCAAGTCTCCTTTGGAGGGCTCGATCAGATTCTAGCGCCACCTGCTTGGTCTTCTACTCAGCCAAAGATGCGCTCTTACTTCCAGTCGGTCACTGTCACCAAAGTGGTGAAGCCTGATGGGaGTGTTGAGGAGAGGCGCACAGTCCAAGATGGCCAGGGGAACGAGGAAACCACAGTGACTTATATAGGGGGGCGCGAGGGGGTACAGGATCAATCTGGACCGCTCTTACCACCAGgtggcaCACACCCCTTTTTGGAAATGCACGATGATCTTTCCTTGTTTTCAAAATTCTTTGGAGGCAGGAGGTGAACCTATCGATTGGAAGCTCGGAAGAAGAATAAATGTCAAATCATTTCTagacattatttcactgtattacATTGTGGTAAAGTAATGTTTAGGGTTGGTTATATTTTCAGTAAGGATTTAATGTTGTTTATTGCCTCTCTCTTAACTATGGGCAGGCTGGATAAACTAagcttggtcccagatctgtttgtgctcttgccaactccattgctCATTGTCAAGCCAAAAATGACTTGGCATGACAaatgagtgacaaggagttggcatgatgGTACAACAGAATGGCACTCAGGCTAGAATCAACTATGATTGCCAAAATAACTGAGTATTTCTGTTCAGTAAAACATGTAGCATTGCAGTGTGATTCTTAATTGACCAATACCCACTAAGTGAGCTAGGCAGAAAATATTATGGACAAAATTGAAGAGTGAAATAACCCTTTTGTGAATAGTTTGCAGAAACAGCTCAACCTAAATCGAGCATAAGAAAATTCTGACCTGTCAATAtgcatattttatttttgtaaagtCCTTTTCAAATTCTGCAATGTGAATTTATGACTGAAATATAAAATTATTATGTTATAAAATTGCGATGCTTCAATTGCCTCAATTTGCGTCCCACTACTCAGAAGCATTTACATTTTTTGTAGATcacaccaattttttttttttgccatttctATGATGTAAGATTAAAATGAACTAGGCTCTTGCAACAATTAAATGGTATTTCCAGAAAACAAGCGTAAAGTGTAcctttttgttgttgcctaattttGAAGGTTGTTGACCTGCCTTGTAACAAAAGCATTGCTACATGTACTCTGTAATATGGGTTAACTTTAATGTGATCTTCATGATGACATCTGCTACCACATTTTTGCTTTGCAAAAGACACAATCTGATGTATGGCTGGTGTATGTTTTTGCCAGATACTTCTGTAGGTGTGGTGTTAACTGTTGCCTGTTAAACAACAGTCCAAGGcttctgaatttaaaatgtacttGATGTCATACACTTATTTCTTGAAGCAAGAGAGCTAGTAAAGTCTGTTAGAAAAGATAGGATGGTCATCTTATTGATGATTATCATAATTTAGCTAAATGCTCACCTCTGACCTAATCTGTTCCATTATATGGTCAGACTCAACTGGTTtaagaaataaaaaatgtaatctgCA
>XM_021571577.2
AGGCTTTGTCCAAGCGAACCatggagttagtgcctacaaaaatacGCCATTACTATTGTCCTACGGTAAACTGTTCGGTGTGTTCCAAAACCGTCGATTGCTTTATTCTTCAGGGAAGTCTGGCTTTACGGCAGTCTTGAAGTCGTCCTTCGACTAGTTCAGCATGAAGTAGCTACATTTACATCAAACGTTTGATTCAAATGAGCTTATTTGATCTATTTCGTGGATTTTTTGGGGTACCTGGAGGAGGCCATGATCGTGGTGAGGGCCGAAGGGACCCCTTCTTCGATGGCATGACCcacgacgatgatgatgatgatgatgaagaggaggatggaaTCTACTTTGATGGTTCACAGGGTGGTGGTGGCCAGCAGGACCTGTTTGATAATCAGTGGAGGTTTGGGTTCAGCATGGGCCCAAACGGAGTGAGGATCCAGGAGCCTGAGATGTTTGGCCAGTTCTTCAGAGAGATGGAGATCTTCTCACAACTAGGGCGATACGATGGTGTTACCAGTATTGAGGCGCCCCTTTCCCAGGACAGGTCAGAGAAAGGTGGGGGAGGATCCAGTGGAAACTCCTTGAGGGACTTCATGTTGAAAGGCCCCAATGACTGCCCGTGTGGGTCGACTGGGCTACCCTCAGGACCATCAGAAGGCCCCAGAGTCGATAAGAACCCTCCATCTGGTGGCCCATGCTTCCCCAACACACCCTTTGATTACTGGACACCCTTTTCTAAGTTCAATGATAGTTGGAGAGGAAGGCTACAAAGGGGTCAAAAGCAGGAGCCGAAAGCAGACAGAGATCTGGACTCGCAAGTCTCCTTTGGAGGGCTCGATCAGATTCTAGCGCCACCTGCTTGGTCTTCTACTCAGCCAAAGATGCGCTCTTACTTCCAGTCGGTCACTGTCACCAAAGTGGTGAAGCCTGATGGGaGTGTTGAGGAGAGGCGCACAGTCCAAGATGGCCAGGGGAACGAGGAAACCACAGTGACTTATATAGGGGGGCGCGAGGGGGTACAGGATCAATCTGGACCGCTCTTACCACCAGgtggcaCACACCCCTTTTTGGAAATGCACGATGATCTTTCCTTGTTTTCAAAATTCTTTGGAGGCAGGAGGTGAACCTATCGATTGGAAGCTCGGAAGAAGAATAAATGTCAAATCATTTCTagacattatttcactgtattacATTGTGGTAAAGTAATGTTTAGGGTTGGTTATATTTTCAGTAAGGATTTAATGTTGTTTATTGCCTCTCTCTTAACTATGGGCAGGCTGGATAAACTAagcttggtcccagatctgtttgtgctcttgccaactccattgctCATTGTCAAGCCAAAAATGACTTGGCATGACAaatgagtgacaaggagttggcatgatgGTACAACAGAATGGCACTCAGGCTAGAATCAACTATGATTGCCAAAATAACTGAGTATTTCTGTTCAGTAAAACATGTAGCATTGCAGTGTGATTCTTAATTGACCAATACCCACTAAGTGAGCTAGGCAGAAAATATTATGGACAAAATTGAAGAGTGAAATAACCCTTTTGTGAATAGTTTGCAGAAACAGCTCAACCTAAATCGAGCATAAGAAAATTCTGACCTGTCAATAtgcatattttatttttgtaaagtCCTTTTCAAATTCTGCAATGTGAATTTATGACTGAAATATAAAATTATTATGTTATAAAATTGCGATGCTTCAATTGCCTCAATTTGCGTCCCACTACTCAGAAGCATTTACATTTTTTGTAGATcacaccaattttttttttttgccatttctATGATGTAAGATTAAAATGAACTAGGCTCTTGCAACAATTAAATGGTATTTCCAGAAAACAAGCGTAAAGTGTAcctttttgttgttgcctaattttGAAGGTTGTTGACCTGCCTTGTAACAAAAGCATTGCTACATGTACTCTGTAATATGGGTTAACTTTAATGTGATCTTCATGATGACATCTGCTACCACATTTTTGCTTTGCAAAAGACACAATCTGATGTATGGCTGGTGTATGTTTTTGCCAGATACTTCTGTAGGTGTGGTGTTAACTGTTGCCTGTTAAACAACAGTCCAAGGcttctgaatttaaaatgtacttGATGTCATACACTTATTTCTTGAAGCAAGAGAGCTAGTAAAGTCTGTTAGAAAAGATAGGATGGTCATCTTATTGATGATTATCATAATTTAGCTAAATGCTCACCTCTGACCTAATCTGTTCCATTATATGGTCAGACTCAACTGGTTtaagaaataaaaaatgtaatctgCA

Function

symbol description
hax1 Predicted to be involved in negative regulation of apoptotic process and regulation of actin filament polymerization. Predicted to be active in several cellular components, including apical plasma membrane; clathrin-coated vesicle; and sarcoplasmic reticulum. Is expressed in several structures, including hatching gland; lens; mesoderm; myotome; and solid lens vesicle. Human ortholog(s) of this gene implicated in severe congenital neutropenia 3. Orthologous to human HAX1 (HCLS1 associated protein X-1).

NR:

description
HCLS1-associated protein X-1 isoform X2

GO: NA

KEGG:

id description
K16220 HAX1; HCLS1-associated protein X-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571576.2 False 2330 mRNA 0.43 7 30788111 30802586
XM_021571577.2 True 2306 mRNA 0.42 7 30788111 30802586

Neighbor

gene id symbol gene type direction distance location
LOC110496794 LOC106588158 coding downstream 113562 30661601 ~ 30674549 (-)
LOC110496793 LOC106588158 coding downstream 138999 30644510 ~ 30649112 (-)
hcn3 LOC106588157 coding downstream 150251 30620730 ~ 30637860 (-)
ndufv1 LOC106588156 coding downstream 175453 30606694 ~ 30612658 (-)
LOC110515180 NA coding downstream 285931 30498183 ~ 30502180 (-)
ubap2l ubap2l coding upstream 597 30803183 ~ 30896875 (-)
LOC110495992 LOC106588166 coding upstream 109995 30911827 ~ 30955199 (-)
cgnb LOC106588167 coding upstream 156588 30959174 ~ 31005856 (-)
LOC110495994 LOC106588168 coding upstream 206170 31008756 ~ 31014201 (-)
LOC110496925 LOC106588148 coding upstream 246004 31048590 ~ 31051663 (-)
G1537617 NA non-coding downstream 1901 30784937 ~ 30786210 (-)
G1537631 NA non-coding downstream 66438 30721403 ~ 30721673 (-)
G1537194 NA non-coding downstream 83797 30703960 ~ 30704314 (-)
G1537172 NA non-coding downstream 97230 30690294 ~ 30690881 (-)
G1537170 NA non-coding downstream 98445 30688846 ~ 30689666 (-)
G1537686 NA non-coding upstream 89182 30891768 ~ 30892048 (-)
G1537700 cssa27h1orf43 non-coding upstream 102974 30905560 ~ 30905854 (-)
G1537696 NA non-coding upstream 106825 30909411 ~ 30911711 (-)
G1537743 NA non-coding upstream 220048 31022634 ~ 31023078 (-)
G1537744 NA non-coding upstream 224047 31026633 ~ 31026865 (-)
G1537091 NA other downstream 184719 30602716 ~ 30603392 (-)
G1537022 NA other downstream 262738 30519892 ~ 30525373 (-)
G1536703 NA other downstream 503349 30284372 ~ 30284762 (-)
LOC110495963 LOC106574327 other downstream 2435493 28241494 ~ 28368147 (-)
LOC110495955 LOC106574324 other downstream 2751495 27995381 ~ 28092196 (-)
LOC110496004 LOC106588173 other upstream 713525 31492852 ~ 31524883 (-)
LOC100136047 LOC106605923 other upstream 883166 31684840 ~ 31692733 (-)
G1538595 NA other upstream 911920 31714506 ~ 31715181 (-)

Expression


Co-expression Network