LOC110495997 (LOC106570110)


Basic Information

Item Value
gene id LOC110495997
gene name LOC106570110
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 31059021 ~ 31075756 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571598.2
AAAAACGTTTAAGAAAAAACTAAATCAAGGAAGAGATTCTGCAGCTGTAGTTTGGCACGTTTTTGGGGGGGTTCTCAAACCGAGGACATAGACgggaaaataaacacaaaattgGGCACATTTGCACTGTTTGCTTGCCCTGTAGGAAGTATTTGAGAGAGCAGTCATGGAGTCGGCCATTCAGACTATAGTTGGTGTCTTCCTGAAGTCAGCCAAGGGGAAGGAGAGTTTGGGAGGGAATGACTTCCAGAAGCTGGTGAAGAGCCAACTCCACAACATCATGATGGACACGGACAGCTCCGAGGCGGTGAAGAAAATGCGACAGGGCCTGGACTCCAACCAGGACGGTAAAGTCAACTTCGAGGAGTACATGGACCTGGTGGGCTACCTGGCAACCTCGCTGAGTGTGCAATGTACTGCTGCCGTGGAGACGCCAGCCGAGAGCGCTGCCACCGCACCGGAGATCGGGAGTACGCCAGCAGACGtagaggaagagaaggcagaagCGGAGGCACAGCCAGAGGCAGCCACAGCTGTAGAGGAAGAGAAGGTTGAAGTGGTAGAAAAGGTGGAAGAGGCGGAAAAGGTGGAGGAGCCAGCAGCAGCTGGGGAGAAGATAGAGGAGGCGTCATAGGAGTTTAC

Function

NR:

description
protein S100-A16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571598.2 True 642 mRNA 0.53 3 31059021 31075756

Neighbor

gene id symbol gene type direction distance location
LOC110496925 LOC106588148 coding downstream 7358 31048590 ~ 31051663 (-)
LOC110495994 LOC106588168 coding downstream 44820 31008756 ~ 31014201 (-)
cgnb LOC106588167 coding downstream 53165 30959174 ~ 31005856 (-)
LOC110495992 LOC106588166 coding downstream 103822 30911827 ~ 30955199 (-)
ubap2l ubap2l coding downstream 162146 30803183 ~ 30896875 (-)
LOC110495999 NA coding upstream 1420 31077176 ~ 31085443 (-)
LOC110495998 LOC106588170 coding upstream 14899 31090655 ~ 31096283 (-)
LOC110496926 NA coding upstream 383081 31458837 ~ 31459087 (-)
LOC110496004 LOC106588173 coding upstream 417096 31492852 ~ 31524883 (-)
LOC110496005 s10a4 coding upstream 454648 31530404 ~ 31535376 (-)
G1537737 NA non-coding downstream 1881 31056060 ~ 31057140 (-)
G1537759 NA non-coding downstream 14308 31044437 ~ 31044713 (-)
G1537751 NA non-coding downstream 21453 31037052 ~ 31037568 (-)
G1537748 NA non-coding downstream 25299 31031450 ~ 31033722 (-)
G1537747 NA non-coding downstream 27811 31030794 ~ 31031210 (-)
G1537824 NA non-coding upstream 121896 31197652 ~ 31252779 (-)
G1537844 NA non-coding upstream 150497 31226253 ~ 31230295 (-)
G1537931 NA non-coding upstream 280447 31356203 ~ 31358722 (-)
G1537956 NA non-coding upstream 311243 31386999 ~ 31387202 (-)
G1537998 NA non-coding upstream 347090 31422846 ~ 31423074 (-)
G1537091 NA other downstream 455629 30602716 ~ 30603392 (-)
G1537022 NA other downstream 533648 30519892 ~ 30525373 (-)
G1536703 NA other downstream 774259 30284372 ~ 30284762 (-)
LOC100136047 LOC106605923 other upstream 609996 31684840 ~ 31692733 (-)
G1538595 NA other upstream 638750 31714506 ~ 31715181 (-)
atp5if1a LOC106588193 other upstream 981555 32057280 ~ 32058819 (-)
G1539348 NA other upstream 1485970 32561726 ~ 32562120 (-)

Expression


Co-expression Network