XLOC_003425 (CU861893.1)



Basic Information


Item Value
gene id XLOC_003425
gene name CU861893.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 22714015 ~ 22714131 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00006698
TAACACAGCCATATCAGTCTGCAGCCAAAGACCGGTTACACACTGAAGCtaggcagggctgagcctggtcagtacctggaaggAAAACCAGATGGAAAAACTTGGTTGCTGTTGGAG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000115768

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00006698 True 117 rRNA 0.50 1 22714015 22714131

Neighbor


gene id symbol gene type direction distance location
XLOC_003424 si:ch211-86h15.1 coding upstream 83626 22623284 ~ 22630389 (+)
XLOC_003423 BX537143.1 coding upstream 114422 22596726 ~ 22599593 (+)
XLOC_003422 ppfia4 coding upstream 129563 22374419 ~ 22584452 (+)
XLOC_003421 MDFI coding upstream 544989 22109887 ~ 22169026 (+)
XLOC_003420 foxp4 coding upstream 619623 21910343 ~ 22094392 (+)
XLOC_003426 NA coding downstream 206338 22920469 ~ 22927188 (+)
XLOC_003427 csf1a coding downstream 551026 23265157 ~ 23297192 (+)
XLOC_003428 BX571675.1 coding downstream 683139 23397270 ~ 23397385 (+)
XLOC_003429 si:ch73-21d24.1 coding downstream 855738 23569869 ~ 23571593 (+)
XLOC_003430 NA coding downstream 880218 23594349 ~ 23597671 (+)
XLOC_003369 CR854846.2 misc upstream 6590933 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 10002019 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 10019752 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 10028416 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 10033987 12679732 ~ 12680028 (+)
XLOC_003419 NA non-coding upstream 810321 21902677 ~ 21903694 (+)
XLOC_003417 NA non-coding upstream 954990 21612671 ~ 21759025 (+)
XLOC_003418 CR812468.2 non-coding upstream 1063377 21650522 ~ 21650638 (+)
XLOC_003415 NA non-coding upstream 1305181 21406687 ~ 21408834 (+)
XLOC_003432 NA non-coding downstream 1181398 23895529 ~ 23913499 (+)
XLOC_003436 NA non-coding downstream 1301704 24015835 ~ 24024576 (+)

Expression



Co-expression Network