Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941132 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 32058052 ~ 32064812 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037431.1 | True | 880 | mRNA | 0.34 | 2 | 32058052 | 32064812 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496023 | LOC106588191 | coding | upstream | 37213 | 32008229 ~ 32020839 (+) |
| LOC110496022 | LOC106588190 | coding | upstream | 50101 | 31985755 ~ 32007951 (+) |
| LOC110496020 | LOC106588189 | coding | upstream | 105511 | 31924273 ~ 31952541 (+) |
| LOC110496019 | LOC106588188 | coding | upstream | 138629 | 31881946 ~ 31919423 (+) |
| LOC110496018 | LOC106588187 | coding | upstream | 200035 | 31813905 ~ 31858017 (+) |
| LOC110496027 | LOC106588195 | coding | downstream | 276897 | 32341709 ~ 32351799 (+) |
| LOC110496028 | NA | coding | downstream | 287243 | 32352055 ~ 32361876 (+) |
| LOC118941135 | NA | coding | downstream | 509144 | 32573956 ~ 32659643 (+) |
| LOC110496032 | LOC106588200 | coding | downstream | 655537 | 32720349 ~ 32964969 (+) |
| LOC110496033 | LOC106588201 | coding | downstream | 929722 | 32994534 ~ 33050381 (+) |
| G1538342 | NA | non-coding | upstream | 65984 | 31991022 ~ 31992068 (+) |
| G1538326 | NA | non-coding | upstream | 75018 | 31982609 ~ 31983034 (+) |
| G1538330 | NA | non-coding | upstream | 78589 | 31979230 ~ 31979463 (+) |
| G1538323 | NA | non-coding | upstream | 87296 | 31970502 ~ 31970756 (+) |
| G1538317 | NA | non-coding | upstream | 92031 | 31963832 ~ 31966021 (+) |
| G1538382 | NA | non-coding | downstream | 15437 | 32080249 ~ 32080726 (+) |
| G1538974 | NA | non-coding | downstream | 185375 | 32250187 ~ 32250417 (+) |
| G1539280 | NA | non-coding | downstream | 441197 | 32506009 ~ 32506227 (+) |
| G1539310 | NA | non-coding | downstream | 466278 | 32531090 ~ 32531297 (+) |
| G1539311 | NA | non-coding | downstream | 468009 | 32532821 ~ 32533074 (+) |
| G1538208 | LOC106588182 | other | upstream | 303861 | 31753710 ~ 31754191 (+) |
| LOC110496008 | LOC106588176 | other | upstream | 477732 | 31578096 ~ 31580320 (+) |
| LOC110496006 | LOC106588175 | other | upstream | 485813 | 31568375 ~ 31572239 (+) |
| G1537251 | NA | other | upstream | 1230006 | 30822508 ~ 30828046 (+) |
| G1536720 | NA | other | upstream | 1760706 | 30297131 ~ 30297346 (+) |
| G1539641 | NA | other | downstream | 955416 | 33020228 ~ 33020544 (+) |
| G1539671 | LOC106582599 | other | downstream | 994178 | 33058990 ~ 33059857 (+) |
| LOC110496797 | LOC106570068 | other | downstream | 1390748 | 33455560 ~ 33458964 (+) |
| G1540551 | NA | other | downstream | 1424525 | 33489337 ~ 33491121 (+) |
| LOC110496043 | LOC106588212 | other | downstream | 1470464 | 33535229 ~ 33537569 (+) |
