LOC110496026 (LOC106588194)


Basic Information

Item Value
gene id LOC110496026
gene name LOC106588194
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 32087227 ~ 32114802 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571652.2
TACGAAGCCGGGAGTAAAAGTACCAACAATATATTGGAGCTCGTAAAGGAAAGACAAGAACACATATTCTGCTTTCAGGACTCTTTGGAGCTCCAATATACAATCAATTCGAAATGTGGCTATAGTCAGTTTATCTGGATATAGCAACAGAGAAAAGTTGGTAGTACACTCTTTGGAGTTTGGTCAGAGTCGTTTAATTTGACATTTGCTTGTGGAAGTGGACACTGCTCTAGAACTTGGGATCGATCCGACACAGTCGGGTCTGGACTTGCCATTTACAGTTTCTGCTGTCGCCCCTTGCTGAACGTTTTGGCCCGAACATTCTTCGATGACAACATGAAGACTTCGAAAGTTGCTTCCTGAATCCAGCTCGAGTAATTGTGGACCTTTGAATGGAGAGTGTGCACTAATAGAACGTTCTTAAGACACAGCTTTGACacatgactgtctgtctgtcccactgaAGCCTTTGAGCCCCATCTAATTCCTCAGAGACTAAACCAACAAGGACCAAGCAACCGAAGTCACATTGCAACAAATTGCATAAATAGAGGAGAGAAAAAAGAGTGAAATCGATTTGTGTCTCCTCGAAACACCCTCTCAAAGCGACCACACAATGACGTGGTCACCTCCCCAGTCCGGGCCCTTTGTGGCCCTTTTGGCCCTTCTTTTCCTCGGTTTGACTTCCAGCGTCCCTTCCGGCCCGGCCTCTGATACCTGCGCCTCCCTGGAGCAGAGCCGCTTCTTCGGGCTGTTCTCTTCGACCGCCAACCTGCCCTCCACGCCGTGCTCCTGGACCCTGCAGAACCCAGACCCTCGCCGCTACACCGTCTACATGAAGATCACCAAGCCCACCGACTCCTGCCTGCCCCGCCAGGTCAAGACCTTCCAGTTCGACTCCTTCATCGAGACCTCTCGCACCTACCTTGGTATGGAGAGCTTTGATGAAGTCGTCAGATTGTGTGACGCTTCAACTTCTGTAACCTACCTGGAGTCCAGCAAGCAGTTCCTGCAGCTCCGCAAGGTGGCGCCAAGACACGGCCTGGAGattgtggagggagagagcagcggCGAGTTCAAGGCCGAGTTCCTGGTGGTGGGCAAGAGGAACCCCAGTATGCCAGCCTGTCAGAAGCTGTGCCAGTGGCTGGAGAATTGTTTGTCCACCAGCACCCATCTCAACCCCTGCGGCATCATGAACACCCCCTGCCAGTGCTGGGAGACCCCCGTCAGGAAGCCCGGCGGCTGCTACCGTGGAGGCGTCTACCTGGAGAAGTGCATCCCAACCCCCCGAGACACTGGACGTGAAATTGTACGCGACGCCGAGATCATAAAGGGCTGGAGTGGGTGGGGCCGCTGGTCTGAGTGCAGTATGGAGTGCGGGGGTGGAGTCCAGGTGCGCAGCCGAGCCTGTCAGCCAGAGGATAGTGTGTGTGAAGGCGTGGTCGAAGAGGGGCGGGCCTGCAACCCTCAGCCCTGCATTGGTCAAGTGCACAGCCGTAGCCAAGCCCTGGCTTCCATCGTCGGCCTGAAAAGAGACAACACTGATGTTCCTATCACTGGAGTTGTGGCCCCTCAAACAGTGGATGCTGCTGCGGTTGCAGATGAGTGGTCCCCCTGGAGTGTGTGTTCAGTGAGCTGTGGAGAGGGCTGGCAGGCCCGCTCCCGTTTCTGTGTTACCTCCTCCTACAGCACCCAATGCACCGGCCCCCTCCGCGAGAACCGGCCCTGCAACAACACCATGGTCTGCCCCGttGATGGAGCTTGGGACGAGTGGTCCCCATGGAGCCTGTGCTCTTCCACCTGCGGCCGTGGTTACCGTGACCGCACCCGCATCTGCAAGCAGCCCCAGAACGGAGGAGAACCCTGCAAGGGACCCATCAAACAGACCAAGTTCTGCAACATCGCAGTCTGCCCAGTGGACGGTGCCTGGAACGAATGGTCTGGTTGGACCACCTGCTCCACCTCTTGCTCCAATGGCACCAAGCAGAGGACACGTGAATGCAACGGGCCGTCCTACGGAGGTTCGGAGTGCCGTGGTGACTGGCGTGAGACCAATAACTGCTTCCTGAAAGATTGCCCAGttGATGGACGCTGGTTGTCATGGAGCTCATGGGGAAGCTGCAGTAAGACCTGTGGGGGAGGAAGCCAGCAGAGACAGAGGATGTGCGAAGGACCTTACTTCAGTGGAGAGACttgccctggagagagaggagagctgagacGCTGCAACGAGAAAAGATGCCCAGAACCCCATGAGATCTGTCAGGAGGAGACCGATGGTGATGTTGTGTGGAAGAGAACCCCAGCAGGAGATATGGCGGCCGTGACCTGCCCTACAGACTCCACCGGCATGATCTTGCGCCGATGCACCCTTGGCGCTGTAGGCCTTGCTTATTGGGAGAACCCGACCCACATCAAGTGCATCTCCAAGAACTACCAGGACATTTCCTTGTTGGCCCAGCATGGTGTTGATAAGGCTCAGAAGGGCCTGATGGCTGATGGGATTTCTGAGGTGATCTCCCGACTGAGGGCCACCTCTGATGAGGGGACCAAGTACAGCGGAGACCTGTTGTCCATCATGGATGTACTCAGGAACACCACTGAGATCTACAAGGGAGTCGGATACAGCCTGAGCAATGCTGATGTGGAGAACTATGCCCAGACAATCAGCAACTTACTGAAGGAGGAACATCATGACAAATGGGAGGAGGCACAGCTGATGGGCACTAACATCAAGGAGTTCTTGCAGCTTGTCGAGGACTTTGTGGACATGATCGGTATGCAGATGAAGGACTTCCAAGACATTTATGAAGTCACCGAGAATTTAGTGTTGAGCATCCATAAGCGCCCCACAACCATGACCACCGACTTCACCTTCCCAGTGAGAGGATGGAGAGGCATGATGGACTGGGTCAGGACCTCAGAGGAGAAGATCACTGTTTCCCGTGATGCTCTGTCCATCGACCAGTCTGagggCACCACTGCATTTGTGACCGGGATCATTCTCTACAGAAACCTCAGCTCTATCTTGTCCTTCCAAAGTAACAGCACCGTCCTCGACTCCAAGGTAGTCACAGTTATGGTCAAGCCCACCCCAGGCCTGCTGTCCCCCCCAGTGGAAATCGAGTTCCCCCACCAACATAATGACACCATAAATGAAACTTGCATCTCCTGGGATGAGAGTGAAACTTCTTCGCTGCTTGGATCTTGGTCTGCGCGTAGCTGCAGAGCGGTCGCTGTTGATTCATTCAGAACCAAATGCGTGTGTGACAGGCTCTCCACCTTCGCCATTTTAGCGCGTCtaaaccctgatatgAACATGGATAAGAATCTTCTTCCCTCTGTGACACTCATCGTGGGCTGTGGGgtctcctctctcacccttctGCTCCTCATCATTATCTATGTCTCCGTCTGGAAGTATATCCGCTCGGAGCGCTCAGTGATCCTCATCAACTTCTGCCTCTCCATTATCTGCTCCAATGCCCTCATTCTGGTTGGACAAACCCAGGCTCGCAACAAGgtggtgtgtggtgtggtggctgCCCTCCTCCACTTCTTCTTCCTCTCATCTTTCTGCTGGGTGCTGACGGAAGCGTGGCAGTCCTACATGGCTGTCACGGGCCGTCTGCGCAACCGCATCATCCGCAAGCGTTTCCTCTGCTTAGGCTGGGGACTCCCTGCTCTGGTGGTGGCTGTGTCTGTTGGATTTACCAAGGCTAAGGGATATGGCACCGTCAACTACTGCTGGCTCTCTCTGGAGGGTGGACTCCTCTACTCGTTCGTTGGGCCCGCtgctgctgttgttctgGTGAACATGGTAATTGGCATCCTGGTCTTCAACAAACTGGTGTCCAAGGACGGCATCACCGATGTCAAACTGAAGGAGCGAGCGGGAGCGTCCCTGTGGAGCTCCTGTGTGATTCTGCCCCTGCTGGCCCTCACCTGGATGTCCGCTGTCCTGGCCATGACCGACCGCCGCTCCGCTCTCTTCCAGATCCTCTTCGCTGTCTTTGACTCCCTGGAAGGGTTCATAATCGTCATGGTGCACTGCATCCTGCGTAGAGAGGTCCAAGAGGCAGTGAAATGCAGAGTTGTTGACCGTAAGGACGATGGCAATGGAGATTCTGGCAGTTCCATCCAAAATAGCCACCACACCCAGCTCATGTCTGATTTCGAGAAGGATGCTGAATCCAACAGACCTGGTGGTATGAACTCTTCCTGTGAGGAGAAGATgcccctcccacctcagctgcCCCTCCCCATGAGCTCCAACTTCCACACCCTGCCCTCCCACACCACCAAGGCCCACATGCAGGCCGTGCCCGAGTACTCCAGCCACACCCTCACTCTGAAGAGGGAGAAGAGTTGGCTGCATGGCGGCATGGACCCGTCCTCCTGCGGGAAACCCATTTATGTGTGCGACGGTGAGCTCTTCCAGCAGCTGGATGCCGACCTGGTGTGCGGCCAGGCGGAGGGGAGCTGCCCCGACGGTAGCGGCTACTTGCTCCTGCCCAACACCACCTCCACCCTTCGCAAGGCCAAAGAGGACCCGTCCAAGTACAACATCAGCGTGGAGCAGCTTCCACAGACCAGGCTGGTTCATCTCAGTGGGCCCTTCGCTGAGCCCCAGGCTGCCTTCGGACTCAAGACGCTACCGTCCGACCGGGTCAGCGTGTCCTACTCGGAGAGGGACTCTCCCATCCAGAACATCCACAACATGTCCAGCGAGTCTCACATCACCCACAGCAGCCTGGGAGACACCTTCGACTCTATGAACTCCATGATGTCCAAGAGCGAGACCATCTCCACACTGTCCATGAGCTCCCTGGAGAGACAGAAGTCCCGTTATGCTGAATTAGATTTCGAGAAGATCATGCACACAAGGAAACGTCACCAGAACATGTTCCAGGACCTCAACAGGAAATTACATCACGCTGAGAAACAAGACAGAGAGTCCCCTGCTTCAGACAGCAAGTCTGTGAGATGGAGTGTGTCCTCTGGAGGAAGTGACAAAACAAACCACAGCGACAAGCAGCAGCAACAGGTGGAGAGACCCTGGGATGGGGTCCAGAGGACGCAACATTCACCGCCTGCCTGGGTGCGGAAAGACCTAGAGCCCCTGGCCGTGTCGCCCCTGCATATGCAGCAGGTGGAGTGGGAGAAGGCTGGAGCCACCATCTCAATGGTCAGCCAGGACATCATCGACCTGCAGACGGAGGTCTGAGAGGATGAGCCTGAGATTGTTCCTTATAGTTCAAACTCGGTCACCTATTCTATTGGTTTGGGGAGAAGAAGAGCCAATGGATccacatggagagaggagaggaagccaaGAACGAACAAgcgaagagaggtgggggaagagagagctgagagagtgCTGAACCCAGAATACATGTCTACAAACCCTCGAcaggagaaagatggagagagatgaaagGAGGGAGGCTATTGTGTTGTCAAGATTTGTTTTCCAGCAAGGACATGATATTGAGCAACACTAGAGAAGCAGTTTGATATTGACTGGTGGTTAGTATCAGATAGTGGCGAATGGTTCCAAGGATTGGTTCTGGTTCTGTTTGTGGTCTGACCATAGAGGTTTCCTTTAATCTTCCGACTGGGTTCAAGAGAGGTGTGGTCGACATGGTTAACATGCGGTCAACAGGCCACTTCGACTCGTTTTAAAACAGTGGGTTTCACTCTACGCCTGAGCTCTAACCAAACCGAACATTTGTACTTTTGTGTTTGCGGCCAAGGCATCTTCCAAGTTAGCTAGGACAAGGCAAGAAGAGACAACTGGACTCCCATCAGACTTGGTGTCTGAACTCAACGCTGTGGTTTATGGACACACCCTTTAATTGCTGTGTTGTAGCTATTATTTTCTCGCTTTGCCAGGAAGTGCATCTAAAGAGCTTCAAAGACTCTTCCATGAGAACTCTCTTCTTGAGACTATGATGCCTATACTGGAGACAAGGCTTGATCATGCTTACAGAGCAGaacattattattatcatgttattatattattattattattattacctgtattttgttttattgttttagCATCGATCGCAGTTTTCAAAAGGACTGCATAGCATTCAGACAGTCAGCGTGTTGGTGGGAACCCTGGTTATGCCTGTGTTCTGCCTCCGCAGCACATGACAGACACATGGAAGAACATCAAGCTCTGTTACAGGAAGAGCAGTGTATTCTGGGAACTGCTGAGCAGCATCATTAGGAAGTGTTGGACAAAGACCATTAGATTCCCACCTCCAGTTCCCAATAAACAAGAGCCCCCGCTATTGGACCTCTTTTCCTTCCTGCGACACACACAGCCTTGCAGAAAGAGCTCTAGATCCCAGGACTATAAGCTGTGAGGCACTTGCCAACGACATGACTTCACTTCCGCAGTGCCAGCTACAAAGGACTCCGACACAACATCCTTGTGTTTTAAAACCATCAGTGTGAAACTAGTGCAATATGATGGGCGCTTGATGCTCAAGCTGGACTGATATCAGAATTATGAGGCCGGTTTTTCTTAAGATGTTTCAATACTCTTTTATAACATGTTCCTCATATTTACAGAGCATATAGATACTTTGTTGTCTAACAAATCTGTGTTAGTAATGAAACACATGAATTCAATAGAGGTTTGCTTGTGTTCCGAGTGGAAGCGCAAGACTACAAATTATTTGGAGGTCTGTGATTAGTAGATTATTCTAATTCTAAAAAGCAAATGTTATATAGAATTAATAATAGCCTATAAGAATATATCTAAAAACAGTGCTTCAGGATAACTGTTTTGACTCCATACCTCACTGTGTGGAGTAACTGAACCTCATGTCTTCTGTAATAGTGTGTTTTTGATAATCTTGTCAATATTGCACTACAGTATGTGCCAAAAATCTTTCCTGTCCCCTATTTCCTTCCTAGCCATAGTGCCCCCCTCTTGTTGTAAATGTATAGTTTTGAGAGCACAAGATGAATGTGATTTTttggaataaaataaaaacatctatATTA

Function

NR:

description
brain-specific angiogenesis inhibitor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571652.2 True 7032 mRNA 0.52 30 32087227 32114802

Neighbor

gene id symbol gene type direction distance location
atp5if1a LOC106588193 coding downstream 28408 32057280 ~ 32058819 (-)
LOC110496024 LOC106588192 coding downstream 30348 32037155 ~ 32056879 (-)
dnjc8 dnjc8 coding downstream 54692 32026557 ~ 32032535 (-)
LOC110496016 LOC106588185 coding downstream 284409 31797068 ~ 31802818 (-)
LOC110496014 LOC106588184 coding downstream 302635 31779264 ~ 31784592 (-)
LOC118941048 NA coding upstream 57746 32172548 ~ 32173426 (-)
LOC118941133 NA coding upstream 221819 32336621 ~ 32347681 (-)
LOC110496030 LOC106588196 coding upstream 250790 32365592 ~ 32417823 (-)
eomesa eomesa coding upstream 335199 32450001 ~ 32454383 (-)
LOC110496796 osbpl10 coding upstream 1057624 33172426 ~ 33309331 (-)
G1538783 NA non-coding downstream 7143 32079853 ~ 32080084 (-)
G1538729 NA non-coding downstream 64464 32021457 ~ 32022763 (-)
G1538746 NA non-coding downstream 104297 31982540 ~ 31982930 (-)
G1538745 NA non-coding downstream 106086 31980536 ~ 31981141 (-)
G1538744 NA non-coding downstream 107431 31979531 ~ 31979796 (-)
G1538803 NA non-coding upstream 11807 32126609 ~ 32126919 (-)
G1538810 NA non-coding upstream 15952 32130754 ~ 32131032 (-)
G1538822 NA non-coding upstream 24064 32138866 ~ 32139078 (-)
G1538824 NA non-coding upstream 24684 32139486 ~ 32139822 (-)
G1538852 NA non-coding upstream 49144 32163946 ~ 32164264 (-)
G1538595 NA other downstream 372046 31714506 ~ 31715181 (-)
LOC100136047 LOC106605923 other downstream 394556 31684840 ~ 31692733 (-)
LOC110496004 LOC106588173 other downstream 563771 31492852 ~ 31524883 (-)
LOC110495994 LOC106588168 other downstream 1073051 31008756 ~ 31014201 (-)
G1539348 NA other upstream 446924 32561726 ~ 32562120 (-)
G1540148 NA other upstream 784776 32899578 ~ 32936569 (-)
G1540473 LOC106581475 other upstream 1276537 33391339 ~ 33391752 (-)
LOC110496048 LOC106588215 other upstream 1487672 33602474 ~ 33610948 (-)
LOC110496049 LOC106588217 other upstream 1542839 33657641 ~ 33674304 (-)

Expression


Co-expression Network