Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110496028 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 32352055 ~ 32361876 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| probable C-mannosyltransferase DPY19L1 |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021571655.2 | False | 2532 | mRNA | 0.46 | 21 | 32352055 | 32361874 |
| XM_036952514.1 | True | 2672 | mRNA | 0.46 | 22 | 32352055 | 32361876 |
32,340,000
32,342,000
32,344,000
32,346,000
32,348,000
32,350,000
32,352,000
32,352,000
32,354,000
32,356,000
32,358,000
32,360,000
32,362,000
32,364,000
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496027 | LOC106588195 | coding | upstream | 256 | 32341709 ~ 32351799 (+) |
| LOC118941132 | NA | coding | upstream | 287243 | 32058052 ~ 32064812 (+) |
| LOC110496023 | LOC106588191 | coding | upstream | 331216 | 32008229 ~ 32020839 (+) |
| LOC110496022 | LOC106588190 | coding | upstream | 344104 | 31985755 ~ 32007951 (+) |
| LOC110496020 | LOC106588189 | coding | upstream | 399514 | 31924273 ~ 31952541 (+) |
| LOC118941135 | NA | coding | downstream | 212080 | 32573956 ~ 32659643 (+) |
| LOC110496032 | LOC106588200 | coding | downstream | 358473 | 32720349 ~ 32964969 (+) |
| LOC110496033 | LOC106588201 | coding | downstream | 632658 | 32994534 ~ 33050381 (+) |
| LOC110496034 | LOC106588202 | coding | downstream | 724725 | 33086601 ~ 33172114 (+) |
| LOC110496035 | tmem42 | coding | downstream | 990919 | 33352795 ~ 33356691 (+) |
| G1538974 | NA | non-coding | upstream | 101638 | 32250187 ~ 32250417 (+) |
| G1538382 | NA | non-coding | upstream | 271329 | 32080249 ~ 32080726 (+) |
| G1538336 | NA | non-coding | upstream | 272725 | 32025784 ~ 32079330 (+) |
| G1538342 | NA | non-coding | upstream | 359987 | 31991022 ~ 31992068 (+) |
| G1538326 | NA | non-coding | upstream | 369021 | 31982609 ~ 31983034 (+) |
| G1539280 | NA | non-coding | downstream | 144133 | 32506009 ~ 32506227 (+) |
| G1539310 | NA | non-coding | downstream | 169214 | 32531090 ~ 32531297 (+) |
| G1539311 | NA | non-coding | downstream | 170945 | 32532821 ~ 32533074 (+) |
| G1539325 | NA | non-coding | downstream | 182435 | 32544311 ~ 32544531 (+) |
| G1539329 | NA | non-coding | downstream | 186072 | 32547948 ~ 32548190 (+) |
| G1538208 | LOC106588182 | other | upstream | 597864 | 31753710 ~ 31754191 (+) |
| LOC110496008 | LOC106588176 | other | upstream | 771735 | 31578096 ~ 31580320 (+) |
| LOC110496006 | LOC106588175 | other | upstream | 779816 | 31568375 ~ 31572239 (+) |
| G1537251 | NA | other | upstream | 1524009 | 30822508 ~ 30828046 (+) |
| G1536720 | NA | other | upstream | 2054709 | 30297131 ~ 30297346 (+) |
| G1539641 | NA | other | downstream | 658352 | 33020228 ~ 33020544 (+) |
| G1539671 | LOC106582599 | other | downstream | 697114 | 33058990 ~ 33059857 (+) |
| LOC110496797 | LOC106570068 | other | downstream | 1093684 | 33455560 ~ 33458964 (+) |
| G1540551 | NA | other | downstream | 1127461 | 33489337 ~ 33491121 (+) |
| LOC110496043 | LOC106588212 | other | downstream | 1173400 | 33535229 ~ 33537569 (+) |
