Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC100136630 |
| gene name | LOC106570065 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33508836 ~ 33512426 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 40S ribosomal protein S5 |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0015935 | small ribosomal subunit | cellular_component |
| GO:0003723 | RNA binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02989 | RP-S5e, RPS5; small subunit ribosomal protein S5e |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021571682.2 | True | 799 | mRNA | 0.51 | 6 | 33508836 | 33512426 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496041 | LOC106588210 | coding | upstream | 19812 | 33480096 ~ 33489024 (+) |
| LOC110496797 | LOC106570068 | coding | upstream | 49872 | 33455560 ~ 33458964 (+) |
| LOC110496040 | LOC106588209 | coding | upstream | 58735 | 33433366 ~ 33450101 (+) |
| nrm | nrm | coding | upstream | 82284 | 33420834 ~ 33426552 (+) |
| exosc7 | exosc7 | coding | upstream | 119082 | 33380590 ~ 33389754 (+) |
| LOC110496043 | LOC106588212 | coding | downstream | 22803 | 33535229 ~ 33537569 (+) |
| LOC110496055 | LOC106588221 | coding | downstream | 426256 | 33938682 ~ 34059960 (+) |
| LOC110496056 | dpy19l4 | coding | downstream | 567682 | 34080108 ~ 34088560 (+) |
| ints8 | ints8 | coding | downstream | 579821 | 34092247 ~ 34116282 (+) |
| LOC110496058 | LOC106588349 | coding | downstream | 614766 | 34127192 ~ 34133734 (+) |
| G1540563 | NA | non-coding | upstream | 5353 | 33503265 ~ 33503483 (+) |
| G1540562 | NA | non-coding | upstream | 7403 | 33501214 ~ 33501433 (+) |
| G1540561 | NA | non-coding | upstream | 7719 | 33500915 ~ 33501117 (+) |
| G1540545 | NA | non-coding | upstream | 31237 | 33477310 ~ 33477599 (+) |
| G1540543 | NA | non-coding | upstream | 32017 | 33476309 ~ 33476819 (+) |
| G1540553 | NA | non-coding | downstream | 1782 | 33514208 ~ 33517215 (+) |
| G1540567 | NA | non-coding | downstream | 11897 | 33524323 ~ 33524542 (+) |
| G1540568 | NA | non-coding | downstream | 12387 | 33524813 ~ 33525053 (+) |
| G1540586 | NA | non-coding | downstream | 42360 | 33554786 ~ 33558100 (+) |
| G1540588 | NA | non-coding | downstream | 57853 | 33570279 ~ 33579015 (+) |
| G1540551 | NA | other | upstream | 17715 | 33489337 ~ 33491121 (+) |
| G1539671 | LOC106582599 | other | upstream | 448979 | 33058990 ~ 33059857 (+) |
| G1539641 | NA | other | upstream | 488292 | 33020228 ~ 33020544 (+) |
| G1538208 | LOC106588182 | other | upstream | 1754645 | 31753710 ~ 31754191 (+) |
| G1540996 | NA | other | downstream | 566292 | 34078718 ~ 34079074 (+) |
| mbpa | LOC106588233 | other | downstream | 1371088 | 34883492 ~ 34898413 (+) |
| G1541989 | NA | other | downstream | 1770177 | 35282603 ~ 35283706 (+) |
