LOC118941240


Basic Information

Item Value
gene id LOC118941240
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 33510212 ~ 33510343 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037569.1
agcGAGGCTAGAGTCACGCCTTTACAACCCTCATTGTCTTGGTGTGCTAGAGTGCTCGCAGAGTAAACTACTTTGCATATTCATTGGCTGTAGTCTCATGTGGCCCAGTCAATCACCAGCTCAGAAACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037569.1 True 132 mRNA 0.48 1 33510212 33510343

Neighbor

gene id symbol gene type direction distance location
LOC110496041 LOC106588210 coding upstream 21188 33480096 ~ 33489024 (+)
LOC110496797 LOC106570068 coding upstream 51248 33455560 ~ 33458964 (+)
LOC110496040 LOC106588209 coding upstream 60111 33433366 ~ 33450101 (+)
nrm nrm coding upstream 83660 33420834 ~ 33426552 (+)
exosc7 exosc7 coding upstream 120458 33380590 ~ 33389754 (+)
LOC118941235 NA coding downstream 459 33510802 ~ 33510928 (+)
LOC118941241 NA coding downstream 1487 33511830 ~ 33511959 (+)
LOC110496043 LOC106588212 coding downstream 24886 33535229 ~ 33537569 (+)
LOC110496055 LOC106588221 coding downstream 428339 33938682 ~ 34059960 (+)
LOC110496056 dpy19l4 coding downstream 569765 34080108 ~ 34088560 (+)
G1540563 NA non-coding upstream 6729 33503265 ~ 33503483 (+)
G1540562 NA non-coding upstream 8779 33501214 ~ 33501433 (+)
G1540561 NA non-coding upstream 9095 33500915 ~ 33501117 (+)
G1540545 NA non-coding upstream 32613 33477310 ~ 33477599 (+)
G1540543 NA non-coding upstream 33393 33476309 ~ 33476819 (+)
G1540553 NA non-coding downstream 3865 33514208 ~ 33517215 (+)
G1540567 NA non-coding downstream 13980 33524323 ~ 33524542 (+)
G1540568 NA non-coding downstream 14470 33524813 ~ 33525053 (+)
G1540586 NA non-coding downstream 44443 33554786 ~ 33558100 (+)
G1540588 NA non-coding downstream 59936 33570279 ~ 33579015 (+)
G1540551 NA other upstream 19091 33489337 ~ 33491121 (+)
G1539671 LOC106582599 other upstream 450355 33058990 ~ 33059857 (+)
G1539641 NA other upstream 489668 33020228 ~ 33020544 (+)
G1538208 LOC106588182 other upstream 1756021 31753710 ~ 31754191 (+)
G1540996 NA other downstream 568375 34078718 ~ 34079074 (+)
LOC110496058 LOC106588349 other downstream 617998 34127192 ~ 34133734 (+)
mbpa LOC106588233 other downstream 1373171 34883492 ~ 34898413 (+)
G1541989 NA other downstream 1772260 35282603 ~ 35283706 (+)

Expression


Co-expression Network