Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110496045 |
| gene name | lynx1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33572014 ~ 33573707 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| lynx1 | Enables acetylcholine receptor binding activity and acetylcholine receptor regulator activity. Involved in regulation of neurotransmitter receptor activity. Predicted to be located in membrane. Predicted to be active in plasma membrane. Predicted to be anchored component of membrane. |
| description |
|---|
| ly-6/neurotoxin-like protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021571687.2 | True | 375 | mRNA | 0.53 | 3 | 33572014 | 33573707 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496042 | ddah2 | coding | downstream | 38327 | 33526141 ~ 33533687 (-) |
| cdcp1b | cdcp1 | coding | downstream | 157056 | 33392413 ~ 33414958 (-) |
| LOC110496036 | LOC106588206 | coding | downstream | 192506 | 33366687 ~ 33379508 (-) |
| LOC110496796 | osbpl10 | coding | downstream | 262683 | 33172426 ~ 33309331 (-) |
| eomesa | eomesa | coding | downstream | 1117631 | 32450001 ~ 32454383 (-) |
| LOC110496046 | lynx1 | coding | upstream | 6089 | 33579796 ~ 33581971 (-) |
| LOC110496048 | LOC106588215 | coding | upstream | 33242 | 33602474 ~ 33610948 (-) |
| LOC110496928 | NA | coding | upstream | 69219 | 33642926 ~ 33652838 (-) |
| LOC110496049 | LOC106588217 | coding | upstream | 83991 | 33657641 ~ 33674304 (-) |
| LOC110496050 | csnk2b | coding | upstream | 118685 | 33692392 ~ 33695909 (-) |
| G1540656 | NA | non-coding | downstream | 33820 | 33537970 ~ 33538194 (-) |
| G1540627 | LOC106570065 | non-coding | downstream | 58030 | 33508819 ~ 33513984 (-) |
| G1540648 | NA | non-coding | downstream | 63403 | 33508353 ~ 33508611 (-) |
| G1540640 | NA | non-coding | downstream | 73715 | 33498069 ~ 33498299 (-) |
| G1540637 | NA | non-coding | downstream | 77212 | 33494599 ~ 33494802 (-) |
| G1540713 | NA | non-coding | upstream | 46729 | 33620436 ~ 33621322 (-) |
| G1540633 | NA | non-coding | upstream | 49840 | 33623547 ~ 33623787 (-) |
| G1540717 | NA | non-coding | upstream | 53272 | 33626979 ~ 33627240 (-) |
| G1541007 | NA | non-coding | upstream | 83018 | 33656725 ~ 33656944 (-) |
| lrp12 | lrp12 | non-coding | upstream | 280180 | 33828341 ~ 33867431 (-) |
| G1540473 | LOC106581475 | other | downstream | 180262 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 635445 | 32899578 ~ 32936569 (-) |
| G1539348 | NA | other | downstream | 1009894 | 32561726 ~ 32562120 (-) |
| atp5if1a | LOC106588193 | other | downstream | 1513229 | 32057280 ~ 32058819 (-) |
| G1538595 | NA | other | downstream | 1856833 | 31714506 ~ 31715181 (-) |
| G1541318 | NA | other | upstream | 588220 | 34161927 ~ 34162458 (-) |
| atp9b | atp9b | other | upstream | 1161667 | 34735374 ~ 34794929 (-) |
| G1542988 | sast | other | upstream | 1563930 | 35137637 ~ 35138554 (-) |
