Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110496928 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 33642926 ~ 33652838 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sperm acrosome membrane-associated protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002469622.2 | True | 1022 | mRNA | 0.46 | 3 | 33642926 | 33652838 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496048 | LOC106588215 | coding | downstream | 31978 | 33602474 ~ 33610948 (-) |
| LOC110496046 | lynx1 | coding | downstream | 60955 | 33579796 ~ 33581971 (-) |
| LOC110496044 | LOC106588213 | coding | downstream | 69060 | 33560842 ~ 33573866 (-) |
| LOC110496045 | lynx1 | coding | downstream | 69219 | 33572014 ~ 33573707 (-) |
| LOC110496042 | ddah2 | coding | downstream | 109239 | 33526141 ~ 33533687 (-) |
| LOC110496049 | LOC106588217 | coding | upstream | 4860 | 33657641 ~ 33674304 (-) |
| LOC110496050 | csnk2b | coding | upstream | 39554 | 33692392 ~ 33695909 (-) |
| LOC110496051 | LOC106588219 | coding | upstream | 44325 | 33697163 ~ 33746785 (-) |
| vps72a | vps72 | coding | upstream | 131096 | 33783934 ~ 33813301 (-) |
| lrp12 | lrp12 | coding | upstream | 175503 | 33828341 ~ 33867431 (-) |
| G1540717 | NA | non-coding | downstream | 15686 | 33626979 ~ 33627240 (-) |
| G1540633 | NA | non-coding | downstream | 19139 | 33623547 ~ 33623787 (-) |
| G1540713 | NA | non-coding | downstream | 21604 | 33620436 ~ 33621322 (-) |
| G1540656 | NA | non-coding | downstream | 104732 | 33537970 ~ 33538194 (-) |
| G1540627 | LOC106570065 | non-coding | downstream | 128942 | 33508819 ~ 33513984 (-) |
| G1541007 | NA | non-coding | upstream | 3887 | 33656725 ~ 33656944 (-) |
| G1541115 | NA | non-coding | upstream | 222412 | 33875250 ~ 33939003 (-) |
| G1541207 | NA | non-coding | upstream | 378659 | 34031497 ~ 34033219 (-) |
| G1541225 | NA | non-coding | upstream | 417129 | 34069967 ~ 34070184 (-) |
| G1540473 | LOC106581475 | other | downstream | 251174 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 706357 | 32899578 ~ 32936569 (-) |
| G1539348 | NA | other | downstream | 1080806 | 32561726 ~ 32562120 (-) |
| atp5if1a | LOC106588193 | other | downstream | 1584141 | 32057280 ~ 32058819 (-) |
| G1541318 | NA | other | upstream | 509089 | 34161927 ~ 34162458 (-) |
| atp9b | atp9b | other | upstream | 1082536 | 34735374 ~ 34794929 (-) |
| G1542988 | sast | other | upstream | 1484799 | 35137637 ~ 35138554 (-) |
| LOC110496081 | LOC106588241 | other | upstream | 1522468 | 35151351 ~ 35203984 (-) |
