ints8 (ints8)


Basic Information

Item Value
gene id ints8
gene name ints8
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 34092247 ~ 34116282 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571707.2
CATGATTGGAGCGGATCCGGATATGACGTCAGAAATGTTTATTGAGCAAATCAAATCATTAGAAACATCTTGGagtaagctagctaacgttagttgtcAAAACATTAAACCTTTCTGAATATTTTTAGAATTGCAAACTCAAAAAAGGTGGAGATGAGTGCAGAGGCGGCAGACCGTGTGGCTGTGAGCGGCAGCCGGCCGAGCACTCCTCCTCAGACCTCCTGGTTCGAGTTTCTCCTGGATGAGATGCTGCTGGAGAACCACCTCCAGAAGTCCCATCCAGATCCTGTTCCAGTGCAGCTTGTCATCCAGTTCCTTGAACAAGCGGCCAAGCCCTCTGTGAATGAGCAGAACCAAGTCCAGCCTCCTGCAGACAACCGCAGGAACCGCACTCTGAAGCTGTTGGCTCTTAAAGTAGCAGCACACTTGAAGTGGGATCTAGATGTATTGGAGAAAGGCTTGACTATTCCTGTGTTGAACATGCTGCTGAATGAGCTACTGTGTGTGAGTAAGGTTCCACCTGGAGTGAAACATGTTGACCTGGATCTGTCCACCTTGCCTCCCACCACTGCCATGGCTGTCATCATCTACAACCGCTGGGCCATACGAACCATTGTGTTAAGTAGTTTTCCAGAAAAACAGACAAAACCCGGGCCTCATCAGATGAACATGTTGAATGTTGTGCAGCAGGAGAAAGAGTTGACTGAAAATATCCTGAGCGTGCTGAAAGAGCAGGCAGCGGACTCTATCATGGTGTTGGAGGGATCTCTTGGTCTGAAGAAGGACTTCTACATCCACACCCTGAGGACTCTGGACCTGCTGGCTGCTGACCCCAGTACTGCTAACGGAGAAACGGAGTCCTCCACAGCAGGCCTTAGGATCAGTGCTGATGAGCTGCACTGTCAGGTGCATTATGATTTGGGAGGTATTTTCTTTCAACAAGGCTGCTCAGACCAACTGGCATATGAGAAGGCTAGAGAGCATTTTCAACAAACACGAGAGTTGCTGTTGAAGTTCGACTTGACGCTTCACGTTCACCTGGATGAGAAGCGTCTTGCTGGGTACTGGAACGCCTGCAGGGCCCTGACTGGAGCCTTGGACCCCAGTGACACCCAGCTAAACCCCTACGGACAGATCAACAGCCTCATCAGAACTCACAACTACCAGGCTCTTGTAGAGGCTTTCATCAAAGACAACGTGTCCCTCAGCTTGCCCAACCACCTCAGACAGTCTGTCCTGAGGGAGTTTTTGCACAAAGTCCAGCAAGGGGAGAGGGGCCTGGACGAAGTGTGTCACAAGCTTTGCGTGTGCAACGCTGTTCGAGACGCCCTGCAAGGGGAGGTCCTCAGTGTGCGTTTTCACCAGCTGCTCCACAAGCCAAGGAAACATGTGGTGGACTTTATGCTAGAGGTATGCACAAGGTCATTAGACAAGGACCGTTCATCAGAGACATCCAAGAGGAAGATGGTTATTTTTCTAAAAACCCTGTGTGAGAGCTTGGCAGAGCCCCACCTGGTGTTCGTGGTGACCGCCCACAAGCTGTTCACGGAGCTGCTGaaggaggaggataggaagatCCTGGTGGAGCAGATGAGGAAGAGGTCAGCCACGGTCAACCTCTGTGCCAAGCCTCTGCCCTCCTTCTATGATATCCCAGCTGCGGCCAGTGTCAACATTGGACAGCTGGAGCAGCAGCTCATCCTCTGCCTGGACGCCCGCCGCATCCGGCAGATCCTAATTGAGCTGCACAGCATGGCCGAACGACCCTTCTGGCGGGTTAACAACAAGTGGGAAGTTCCTCCAGATTACATCAATGTGATACTCAACATCAAAGACAACCTGACCAAGGATCTGGTGTACATCCTCATGGCCAAAGGGCTTCACTGCATCACTGTAAAGGACTTTGCCCACACGCGGCAGCTCTTCTCAGCCTGTCTGGAGCTGGTGACTGAGTTCTCTCCTAAGCTAAGGCAGGTGATGCTAAACGAGATGCTGCTTCTGGAGGTGCGGGCCCATGAGACTGGGGTGGCTGAGGGTAGCAATGTCAGACCCCCACCCGACCTGGTCAGCAGGGTGCGAGGCTACCTGGAGATGAGGATACATGATCTCCCTCTGCGCCAGATAGTAGGGGAGGAGTGTGTGGCCTTCATGTTGAACTGGAGGGAGAATGAATACCTGACACTGCAGGTTCCCCAGCAGCTGGTCATGAACAACCCCTACATCAAGCTGGGTCAGCTCCTGGCCTCCACCTGTAAGGAGCTCCCGGGTCCTAAAGAGAGCCGGCGTACAGCCAAAGAGTTGTGGGAGGTGGTAGTCCAGATCTGCAGTGTGTCGAACCAGCACAAGAGAAACAGCGACGGACGTGTTAGCCTCATCAAACAGAGAGAGTCCAGTATGGGCATCCTGCAAAGGAGCCGATTCATCACATTCATCAAGAAGCTTCGGGAACCACTGGTGCTGACCACCCTTATCTCACTTTTCGTGAGGTTTCATAGCATAGTGCGGGATGATATTGTCAATGAAGTGACAGCAGAATACCTTGCCATTTGGCCATCAACCCTGGCAAACATGCAGGCTGTGGATGTGGAGGCGGTGGCTGTGACGGTTAAAGAGCTTGTGACCTACGCCCTTACACTGAACCCCAACAACCAGTCCTGGCTCATCACGCAGGCCGACATCTACTTTGTGACCAACCAGTATTCTGCAGCATTGCATTTCTACCTCCAGGCTGGGGCAGTGTGCTCTGACTTCTTTACCAAGGCTGTGGCTCCTGATGTCTACACTGACCAGGTCCTAAAGAGAATGATCAAGTGTTGTTCGATGCTGAACTGTCACACACAGGTTGCAGTTCTGTGCCAGTTTCTAAGGGAGGTGGACTACATGACAGCATTCAAAGCTCTTCAAGAACAGAACAGTCACGATGCCATGGATTCCTTCTATGACTACATCTGGGACGTCACCATCCTTGAATATCTCACACACATCCACCATAAAAGGGGTGAGAGCGAGAAGAGACAAATTGCTATCAAGGCGATTGGACAGACTGAGCTGAATGCCAGTAACCCCGAGGAAGTTCTGCAGCTGGCTGCACAGAAGAGAAAGAAGAAATTCCTGCAAGCTATGGCCAAACTGTACTTTTAGATAAAACCGGGCCACCAAACATGTGGGAGACTTTTTTTCAAATAAATAGGTATCAGTTCATCATTTGTACTCAA

Function

symbol description
ints8 Predicted to be involved in snRNA 3'-end processing. Predicted to be located in nucleus. Predicted to be part of integrator complex. Orthologous to human INTS8 (integrator complex subunit 8).

NR:

description
integrator complex subunit 8

GO: NA

KEGG:

id description
K13145 INTS8; integrator complex subunit 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571707.2 True 3215 mRNA 0.51 27 34092247 34116282
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110496056 dpy19l4 coding upstream 3687 34080108 ~ 34088560 (+)
LOC110496055 LOC106588221 coding upstream 32287 33938682 ~ 34059960 (+)
LOC110496043 LOC106588212 coding upstream 554678 33535229 ~ 33537569 (+)
LOC118941241 NA coding upstream 580288 33511830 ~ 33511959 (+)
LOC118941235 NA coding upstream 581319 33510802 ~ 33510928 (+)
LOC110496058 LOC106588349 coding downstream 10910 34127192 ~ 34133734 (+)
trhrb LOC106588145 coding downstream 145030 34261312 ~ 34265470 (+)
LOC110496061 LOC106588154 coding downstream 180902 34297184 ~ 34300652 (+)
pleca LOC100194709 coding downstream 259814 34376096 ~ 34579125 (+)
LOC110496064 NA coding downstream 358265 34474547 ~ 34482054 (+)
G1540994 NA non-coding upstream 16666 34075128 ~ 34075581 (+)
G1540976 NA non-coding upstream 46567 34043133 ~ 34045680 (+)
G1540967 NA non-coding upstream 61039 34030868 ~ 34031208 (+)
G1540886 NA non-coding upstream 183619 33908231 ~ 33908628 (+)
G1540851 NA non-coding upstream 229095 33862239 ~ 33863152 (+)
G1541243 NA non-coding downstream 4434 34120716 ~ 34120977 (+)
G1541268 NA non-coding downstream 9388 34125670 ~ 34125991 (+)
G1541270 NA non-coding downstream 9944 34126226 ~ 34126432 (+)
G1541278 NA non-coding downstream 17840 34134122 ~ 34134806 (+)
G1540996 NA other upstream 13173 34078718 ~ 34079074 (+)
G1540551 NA other upstream 601126 33489337 ~ 33491121 (+)
LOC110496797 LOC106570068 other upstream 633823 33455560 ~ 33458964 (+)
G1539671 LOC106582599 other upstream 1032390 33058990 ~ 33059857 (+)
mbpa LOC106588233 other downstream 767232 34883492 ~ 34898413 (+)
G1541989 NA other downstream 1166321 35282603 ~ 35283706 (+)
G1542037 LOC106588244 other downstream 1258962 35373871 ~ 35386463 (+)
G1542052 LOC106588245 other downstream 1285555 35400723 ~ 35481348 (+)

Expression

ints8(ints8) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
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ints8(ints8) Expression in each Bioproject

Bar chart with 21 bars.
ints8(ints8) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network