Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118940975 |
| gene name | LOC106611608 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34235388 ~ 34237566 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: uncharacterized protein LOC110017228 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118940975 | True | 1424 | mRNA | 0.59 | 4 | 34235388 | 34237566 |
34,232,000
34,233,000
34,234,000
34,235,000
34,236,000
34,236,000
34,237,000
34,238,000
34,239,000
34,240,000
NC_048582.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gdf6b | gdf6 | coding | downstream | 51497 | 34179033 ~ 34183891 (-) |
| lrp12 | lrp12 | coding | downstream | 367957 | 33828341 ~ 33867431 (-) |
| vps72a | vps72 | coding | downstream | 422087 | 33783934 ~ 33813301 (-) |
| LOC110496051 | LOC106588219 | coding | downstream | 488603 | 33697163 ~ 33746785 (-) |
| LOC110496050 | csnk2b | coding | downstream | 539479 | 33692392 ~ 33695909 (-) |
| fbxl6 | fbxl6 | coding | upstream | 357665 | 34595231 ~ 34619367 (-) |
| nfatc1 | LOC106588230 | coding | upstream | 407550 | 34645116 ~ 34704821 (-) |
| atp9b | atp9b | coding | upstream | 500261 | 34735374 ~ 34794929 (-) |
| sall3b | LOC106588232 | coding | upstream | 557828 | 34795394 ~ 34808500 (-) |
| zbtb22a | LOC106588234 | coding | upstream | 669557 | 34906715 ~ 34923956 (-) |
| G1541337 | NA | non-coding | downstream | 61653 | 34173511 ~ 34173735 (-) |
| G1541334 | NA | non-coding | downstream | 63630 | 34171442 ~ 34171758 (-) |
| G1541313 | NA | non-coding | downstream | 75424 | 34159717 ~ 34159964 (-) |
| G1541308 | NA | non-coding | downstream | 79935 | 34151912 ~ 34155453 (-) |
| G1541295 | NA | non-coding | downstream | 92452 | 34142597 ~ 34142936 (-) |
| G1542514 | NA | non-coding | upstream | 62395 | 34299961 ~ 34300868 (-) |
| G1542543 | NA | non-coding | upstream | 120989 | 34358555 ~ 34363965 (-) |
| G1542566 | NA | non-coding | upstream | 164998 | 34402564 ~ 34402790 (-) |
| G1542567 | NA | non-coding | upstream | 165480 | 34403046 ~ 34403265 (-) |
| G1542574 | NA | non-coding | upstream | 174605 | 34412171 ~ 34412443 (-) |
| G1541318 | NA | other | downstream | 72930 | 34161927 ~ 34162458 (-) |
| LOC110496049 | LOC106588217 | other | downstream | 561157 | 33657641 ~ 33674304 (-) |
| LOC110496048 | LOC106588215 | other | downstream | 624495 | 33602474 ~ 33610948 (-) |
| G1540473 | LOC106581475 | other | downstream | 843636 | 33391339 ~ 33391752 (-) |
| G1540148 | NA | other | downstream | 1298819 | 32899578 ~ 32936569 (-) |
| G1542988 | sast | other | upstream | 900071 | 35137637 ~ 35138554 (-) |
| LOC110496081 | LOC106588241 | other | upstream | 937740 | 35151351 ~ 35203984 (-) |
| LOC110496085 | NA | other | upstream | 1109329 | 35346895 ~ 35351655 (-) |
| G1543128 | LOC106588245 | other | upstream | 1215052 | 35452618 ~ 35504157 (-) |
