zbtb22a (LOC106588234)


Basic Information

Item Value
gene id zbtb22a
gene name LOC106588234
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 34906715 ~ 34923956 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571750.2
TTGACAATAAATAAAGAGGGGTTGGTAGCTGCCCAAACCTACATTATTTTAGTTCTGTGCTACTGTAACGACATGAGTTAGCAATGGTTGGAACTTGGTACATGACGGGCAGTCGCAGACAAGCTCTACACTCCCACCCTACACCCACTTGACATGATGGAACTGTGTCGAGTTTGAGTGTGCGTTACCAAACGAGAAGGACTGAGTGATTGAACAACGCTGCAAAGAATGTGCTTTAGCTGAAATCACTGGCATATGTTGAAGACTCGTTTCGCGTTTGGAGAACCTGATAAGAGGCACAATGGATCAGGACTGCATTGTCTCTGGTGCCCCTGCTGGCCCGGTGGTCCAAGTATGCTTCCCCAGTGTGCGTGCAGCAGTTTTGGACAGCCTGAATGGACAGCGGGAGGAGGGCCGGCTCTGTGACCTCTCCATCCAGGTGCAGGGACAGGTGTTCAGGGCCCACCGCTGTGTGCTGGCTGCCTCCTCGCCATACTTTCACGATCAGGTGTTGCTGAAGAATGTGACGACAGTGTCTCTGCCCTCTGTCATGGACCCTGTGGCCTTTGAGAGTGTCCTGAGTTCAGCCTACACCGGCCGACTGAGCATAGTGCGTGATGACATTGTCAACTATGTAACGGTAGCCAGCTTTCTCCAGATGTGGCATATTGTTGACAAATGCACAGAGATCCTGAAGAGACCCCGACCCCCAACAGAATGCAACCCTGTGGATGTTGCAGCTGCCACACGCCATGGTGCCTCCTCAAGGCAGCAGTCCCCAAGCAGCACTGAGTGCctatacatggagagagaggggaaagagaaggagacGAGGACCTACGGCCAGGTGCAGAATGCTCTGCCGCCATTGGCCACGTGGAGGAGGCCCCATCAGTTCCCCAGGTGGGGCCACCCCAGGCCCTCACCCCAGCCAGCCATGTCCATGCCTGTCCAGAACCTAGCTGACTCACAGCTGGACTCCCACCCTGCTGGGGAGAGTGACTACTCCAGCTGTGAGGAGGTGTGGATGTCCAGCCACAGCAAAGCCAGCCCCCTAAGCCATCATGATGGGAGAGGACTGGACCATAACCACACCAGGCACGGGGGATTTCCTGGTGAGGCATTGAGActgagagctagacagagacagagggcagCACCACCAAGTCCTGAGAAGCTGCATGGCAGGGACAGAGGAAGTGGCTATGGGGAAGATCCTCAGGAGAAGAAGGGGACTGAAAGAGTGATTGAAGCAAGTGAAGGAATGGGAAAAGAgttggaagaggagaagagggagggtcCTGAGCTGAGAGGACACTCTGTGGACTTCCACTCTAGTGTACACCAaggtgaggagggaggacagCCAGAGGGGAGAAAGATCTCAGGGGAGCTgcagaagaaagaggagagacagtTGGGGAGAAGTTCAGCCCTGACTTCTCCCCATGCTGGGGAACCAGATGAGGTGATTCCTGGACCCTCCTGCTTAGCTTCTACACCCTCTACCCAAAAGCAGTGGCAGGCGAGTCCCTGGTCTCAGCAAGTAGCTAGGCTGCAACCTGGAGAGGAAGACTACAGAAGAGAAGACGACGAAGAAGATGACGAGGGGGAAGTGGACTTTGGCCGATTTGCGGATGGTGCCTTTGGAAGGGAAACCTATGATGAGATTGAGGATGGCACCGGACAAGTTTCTCAGAGACCCTTAGTACCTACCTCTCCTGATGACAATGACTTTATCCTGGGGGCCTCAGGGTTGAACTGGCCCAATGGGTCAAACATGACCCATGATGGTGGTACCCCAACCTCCACCTCCAGCTGCCACCTGTCCCCATCTCCTGCTCCATTCCCCCCTTCCTCCTCACCCCCCAtcccatcttcctcctcttccatctcccttGCCGGGGCCCCTTACACAGGAAAAGTGCACTTCTGCCACTGTGGGAAGGCCTACACCCTGAAGAGTATGCGTGACCGCCACGTCAAGATGCAGCATCTCAACCTGCGGCCCTTCGCCTGCCCCGTGTGCGCCAAGAGCTTCAAGATGAAGCACCACCTCACCAAGCACCTGAAGACTCACGGCGGGCTGCGGCCCTATGAGTGTGGCCTGTGTGGGAAGAAGGTCATCTGGAGGGATAGTTTCCTGCGCCACCAGGCACGCTGTGAGAGACTGGCCGAAAGCTACGATGGAGCCGCTGCCAGTAGTAACACCACAGCGGCTGCTGACATGGACGATGGTTATGCCTATGGGTTCAAGGAGGGGGAGGGTTTTTTTTCACAGGGCGGTCAGGTGAAAGTGGAGCAGGCAGACTGTCAGGGGGAGGCGGAGTCTGGGATgagtgtgggggtgggggtggggttggGGCTGAATTAGGCTCTCAGTCAAGGATTGTGGTTAGTCACAGCTTTAAGGAGGAAGCCAGCAACAGGTTTAGCTGAAGCTAAAGGAAGGAGGACGGTGAAATATTGTGTAATATAGGGCCCGCAGCACTTGAAAGTGCTATTAGGTAAGGTGATAATTATGTTCATCATGGTCCATGTGTAAACCATTAACTCAGATCAATGTTGATACGCCTGTTTGAACAACTTGTATGAGGGAGATTTCTGCgttattatttatttaaaggACTATCCCATCATGTCATTGATATCTCGAGAGAGGGAAGAAACATGTCATTTGCTCAATGTGAATCATGTGGTTTTAAAAGTTTGAAGTGTGATGTGAGTGTGTATATTTTGCATTTGATTTTgtatacgagatcttcagtttcttgccaatttctctcatggaattgccttcatttctcagaacaagaatagactgacgagttccagtagaaagtgctttgtttttggccattttgagcctgtagtcgaac
>TU1765631
TGGTTAGTCACAGCTTTAAGGAGGAAGCCAGCAACAGGTTTAGCTGAAGCTAAAGGAAGGAGGACGGTGAAATATTGTGTAATATAGGGCCCGCAGCACTTGAAAGTGCTATTAGGTAAGGTGATAATTATGTTCATCATGGTCCATGTGTAAACCATTAACTCAGATCAATGTTGATACGCCTGTTTGAACAACTTGTATGAGGGAGATTTCTGCgttattatttatttaaaggACTATCCCATCATGTCATTGATATCTCGAGAGAGGGAAGAAACATGTCATTTGCTCAATGTGAATCATGTGGTTTTAAAAGTTTGAAGTGTGATGTGAGTGTGTATATTTTGCATTTGATTTTgtatacgagatcttcagtttcttgccaatttctctcatggaattgccttcatttctcagaacaagaatagactgacgagttccagtagaaagtgctttgtttttggccattttgagcctgtagtcgaacccacacatgctgatgctccagattctcagtccgaagaaggccagttttattgcttctttaatcagatcaacagttttcagctgtgctaacataattgcaaaagggttttctaatgattaattagccttttaaaattatacacttggattagctaacccaacgtgccattgaaacactggagtgatggttgctgataatgggcctctgtacgcctatgtagatattccataaaaaatcagccgtttccagctataatagtcatttaaaacattaacaatatctacactgtatttctgataaatttgatgttgtGTTATTggacaaaaatgttgcttttctttcaaaaacaaggacatttctaagtgaccccaaagttTTGATCGGTAgtatatgtatacagtaccaggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571750.2 False 2879 mRNA 0.53 4 34907123 34923956
TU1765631 True 895 lncRNA 0.37 1 34906715 34907609

Neighbor

gene id symbol gene type direction distance location
sall3b LOC106588232 coding downstream 98623 34795394 ~ 34808500 (-)
atp9b atp9b coding downstream 112194 34735374 ~ 34794929 (-)
nfatc1 LOC106588230 coding downstream 202302 34645116 ~ 34704821 (-)
fbxl6 fbxl6 coding downstream 287756 34595231 ~ 34619367 (-)
LOC118940975 LOC106611608 coding downstream 669557 34235388 ~ 34237566 (-)
LOC110496076 LOC106588236 coding upstream 10652 34933039 ~ 34943891 (-)
LOC110496078 LOC106588238 coding upstream 73516 34997472 ~ 34999239 (-)
LOC110496079 LOC106588239 coding upstream 88054 35012010 ~ 35016157 (-)
LOC110496800 LOC106588240 coding upstream 93022 35016978 ~ 35018421 (-)
ago3b i2c3 coding upstream 127439 35051395 ~ 35093817 (-)
G1542869 NA non-coding downstream 1806 34905037 ~ 34905317 (-)
G1542867 NA non-coding downstream 2769 34904143 ~ 34904354 (-)
G1542865 NA non-coding downstream 6484 34900401 ~ 34900639 (-)
G1542864 NA non-coding downstream 6741 34900147 ~ 34900382 (-)
G1542857 NA non-coding downstream 7557 34899308 ~ 34899566 (-)
G1542881 NA non-coding upstream 1767 34925723 ~ 34925946 (-)
G1542882 NA non-coding upstream 5207 34929163 ~ 34929379 (-)
G1542883 NA non-coding upstream 5691 34929647 ~ 34929925 (-)
G1542885 NA non-coding upstream 7051 34931007 ~ 34931240 (-)
G1541318 NA other downstream 744665 34161927 ~ 34162458 (-)
LOC110496049 LOC106588217 other downstream 1232892 33657641 ~ 33674304 (-)
LOC110496048 LOC106588215 other downstream 1296230 33602474 ~ 33610948 (-)
G1540473 LOC106581475 other downstream 1515371 33391339 ~ 33391752 (-)
G1542988 sast other upstream 213681 35137637 ~ 35138554 (-)
LOC110496081 LOC106588241 other upstream 251350 35151351 ~ 35203984 (-)
LOC110496085 NA other upstream 422939 35346895 ~ 35351655 (-)
G1543128 LOC106588245 other upstream 528662 35452618 ~ 35504157 (-)
LOC118941140 NA other upstream 571366 35492995 ~ 35499681 (-)

Expression


Co-expression Network