Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110496074 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 34918537 ~ 34921751 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002469505.2 | True | 563 | mRNA | 0.39 | 4 | 34918537 | 34921751 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mbpa | LOC106588233 | coding | upstream | 20124 | 34883492 ~ 34898413 (+) |
| LOC110496067 | LOC106588229 | coding | upstream | 278580 | 34633226 ~ 34640621 (+) |
| LOC110496068 | slc52a2 | coding | upstream | 285580 | 34627456 ~ 34632957 (+) |
| LOC110496065 | LOC106588226 | coding | upstream | 294301 | 34618554 ~ 34624236 (+) |
| pleca | LOC100194709 | coding | upstream | 343600 | 34376096 ~ 34579125 (+) |
| LOC110496075 | LOC106588237 | coding | downstream | 37672 | 34959423 ~ 34986188 (+) |
| olah | sast | coding | downstream | 210010 | 35131761 ~ 35139834 (+) |
| LOC110496082 | LOC106588242 | coding | downstream | 322446 | 35237754 ~ 35324664 (+) |
| tomm40l | LOC106588243 | coding | downstream | 413297 | 35335048 ~ 35348295 (+) |
| LOC118941149 | NA | coding | downstream | 491020 | 35412771 ~ 35433941 (+) |
| G1541808 | NA | non-coding | upstream | 12375 | 34905927 ~ 34906162 (+) |
| G1541793 | NA | non-coding | upstream | 45622 | 34872693 ~ 34872915 (+) |
| G1541720 | atp9b | non-coding | upstream | 126379 | 34782152 ~ 34792158 (+) |
| G1541721 | NA | non-coding | upstream | 137699 | 34778921 ~ 34780838 (+) |
| G1541713 | atp9b | non-coding | upstream | 168040 | 34748936 ~ 34750497 (+) |
| G1541827 | NA | non-coding | downstream | 7772 | 34929523 ~ 34929843 (+) |
| G1541828 | NA | non-coding | downstream | 8228 | 34929979 ~ 34930187 (+) |
| G1541815 | NA | non-coding | downstream | 46239 | 34967990 ~ 34968339 (+) |
| G1541811 | NA | non-coding | downstream | 46895 | 34968646 ~ 34969595 (+) |
| G1541809 | NA | non-coding | downstream | 50443 | 34972194 ~ 34972923 (+) |
| LOC110496058 | LOC106588349 | other | upstream | 788878 | 34127192 ~ 34133734 (+) |
| G1540996 | NA | other | upstream | 839463 | 34078718 ~ 34079074 (+) |
| LOC110496043 | LOC106588212 | other | upstream | 1380973 | 33535229 ~ 33537569 (+) |
| G1540551 | NA | other | upstream | 1427416 | 33489337 ~ 33491121 (+) |
| G1541989 | NA | other | downstream | 360852 | 35282603 ~ 35283706 (+) |
| G1542037 | LOC106588244 | other | downstream | 453493 | 35373871 ~ 35386463 (+) |
| G1542052 | LOC106588245 | other | downstream | 480086 | 35400723 ~ 35481348 (+) |
| G1542051 | LOC106588245 | other | downstream | 557084 | 35478835 ~ 35502933 (+) |
| G1542090 | NA | other | downstream | 607792 | 35529543 ~ 35606179 (+) |
