LOC110496079 (LOC106588239)


Basic Information

Item Value
gene id LOC110496079
gene name LOC106588239
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35012010 ~ 35016157 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571760.2
AAAAAATTGAGGTCAGTTGAAGTGCATTTATGGTAACGAGTGAGGAGAAGGCCTTCTTTGTGACAACAACGCCAACAGTATCTGCCAATATGAGGCCAGCAAATGACATTTCATGCAGCTTTGCGCTGTTCGTCTACATCACCACCTTCTTGATCGGGGTACCTGCCAACATCCTGGCATTCTGCACTTTTTGCCGAAAGGTGCGTCGCAAACCTGCCCCCATCGACATCCTGCTCCTCAACCTGACCATCTCCGACCTCATCTTCCTTGCTTTCCTGCCCTTCAAGATGAAGGAGGCTGTTGATGATTTTAACTGGACCCTCCCTTACTTCCTGTGTCCAGTCACTGGCTACCTGTTCTTCTCCACCATCTACAACAGCACCCTCCTCCTGACCGCGGTGAGTGTGGAGCGCTTCCTCAGCGTGGCGTATCCCGTAAGGTTTACAGCACCAGGCAGGGTTTTCCACACACAGTTGGCCTGTGCAGTTTTCTGGATCCTGTCCCTTGCCCACTGCAGTGTTGTCTTCGTAATGCAATTAGACAAAGATGCCGACAACACTACCTGCTATGGAAATTTCAATGATGTCCAGCTTATTACCCTTCTCCCGGTACGCTTAGAGATGTCCCTGGTTCTCTTCTGTGTACCCTTCCTGATCAGCACCTTCTGCTATGTCAACTTCATCCGTATCCTGTCTAGGCTTCCCAACATCAGCCAGCACCGGCGCCTGCGTGCCATCGGGCTGGCGTTGGGGACTCTGCTGGTTTTCGCCCTCTGCTTTGGGCCCTACAACGTGTCCCATATGGTGGGGATCATGCAGAATAAAGTCCCTACTTGGCGCAACAATGCCATTCTGCTCACCACCTTAAATGCCTGTCTGGACCCCATCGTCTTCTACTTCTCCTCCTCAGCTGTTAGGAGCACTCTCAGCCTCTGCCTGAAGCGAATCAAGGCTCAGCTCAATCCAAAGGCCACAGCCGCCCATGCTGGTAATACACCAGACCCTATGGACTCCACCCATTCGTCCAGCCAGAAGTTTGTCGCTGCTGCCAAAAGTGGGACAAATTACACCCCACGATGAATCAGTGACTAGTAAATCAGTTTTGTCCATCCATACAAAGTGTACACAAAGCATTGAAATGGTGTGTTTCCACAATGTGATCTAGAATTCTGATACCATGGTCAAGCATTTTGATAGCATTTGTCCATCTGAAACTGCTATAGAATGTCTGAATTCATCTGCACATGTATTCAGTTCTGTGTGCAGAGTGAGACAACAGTATGATGATGTCTGGTGACTGTGACTGGTAACTTAGCTTGTGTCCCACAAGGgttattacagtacagtacagtaatttGTCTTTGTGGCTAATCTTATGCCATGCTTATTGAGACTGTAAATGCCAGAATATCAATATGCAATTGCTGCACAAATTATATAAAACAAAATCAGTATCAGAAAAGTCACATTGTGGTCATTGCACTTGAATTTACAGTATATTGTGTATGCGTTATTACACATGCAATTCGCTTTTTTACTGATCAGTTAGTCAATA

Function

NR:

description
free fatty acid receptor 3-like

GO: NA

KEGG:

id description
K04326 FFAR3, GPR41; free fatty acid receptor 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571760.2 True 1554 mRNA 0.47 2 35012010 35016157

Neighbor

gene id symbol gene type direction distance location
LOC110496078 LOC106588238 coding downstream 12771 34997472 ~ 34999239 (-)
LOC110496076 LOC106588236 coding downstream 68119 34933039 ~ 34943891 (-)
zbtb22a LOC106588234 coding downstream 88054 34906715 ~ 34923956 (-)
sall3b LOC106588232 coding downstream 203510 34795394 ~ 34808500 (-)
atp9b atp9b coding downstream 217081 34735374 ~ 34794929 (-)
LOC110496800 LOC106588240 coding upstream 821 35016978 ~ 35018421 (-)
ago3b i2c3 coding upstream 35238 35051395 ~ 35093817 (-)
LOC110496081 LOC106588241 coding upstream 135194 35151351 ~ 35203984 (-)
LOC110496085 NA coding upstream 331787 35346895 ~ 35351655 (-)
si:ch73-347e22.4 LOC106588244 coding upstream 361642 35377799 ~ 35392845 (-)
G1542914 NA non-coding downstream 37255 34974476 ~ 34974755 (-)
G1542912 NA non-coding downstream 38915 34972215 ~ 34973095 (-)
G1542847 NA non-coding downstream 42492 34968643 ~ 34969518 (-)
G1542851 NA non-coding downstream 43462 34967990 ~ 34968548 (-)
G1542848 NA non-coding downstream 44133 34964360 ~ 34967877 (-)
G1542859 NA non-coding upstream 23051 35039208 ~ 35050281 (-)
G1542979 NA non-coding upstream 103820 35119977 ~ 35120250 (-)
G1542990 NA non-coding upstream 127667 35143824 ~ 35144167 (-)
G1542993 NA non-coding upstream 131484 35147641 ~ 35149555 (-)
G1542996 NA non-coding upstream 138155 35154312 ~ 35154536 (-)
G1541318 NA other downstream 849552 34161927 ~ 34162458 (-)
LOC110496049 LOC106588217 other downstream 1337779 33657641 ~ 33674304 (-)
LOC110496048 LOC106588215 other downstream 1401117 33602474 ~ 33610948 (-)
G1540473 LOC106581475 other downstream 1620258 33391339 ~ 33391752 (-)
G1542988 sast other upstream 121480 35137637 ~ 35138554 (-)
G1543128 LOC106588245 other upstream 436461 35452618 ~ 35504157 (-)
LOC118941140 NA other upstream 479165 35492995 ~ 35499681 (-)

Expression


Co-expression Network