LOC110496800 (LOC106588240)


Basic Information

Item Value
gene id LOC110496800
gene name LOC106588240
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35016978 ~ 35018421 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951038.1
ATGCAAGTGCCCGTCAAGGACTGTGTCTCCCTGACGGTCTACTCCTTCACGTTCCTGCTGGGCCTCCCCTCCAATCTGCTGGTGCTCTTCGTGTACGTCCGCAAGGCGCGCAAGCGGGGTGCCACGCCCAACGTGGTATACGCACTCAACCTCTGCCTGGCTAACCTGGCACTGATGGCCTGGCTGCCTGTCAAGGCCTTGGAGACTTTCCTCCAGGACTGGGCTCTTccatcgcccctctgtcccgtcTACAGCTTCTTCTTGTTCTCCTCGATGTACGGCAGCTGCCTCTTCCTCACGGCAGTGACGGTGGGCCGCTACCTCAGCATCGCCTTTCCCATCAGCTACAAGCTGTACCGGCGGGGCCGCATCTCCTGCTTCATCAGCGCTGCCCTCTGGGCAGTGGTACTGTTGCACCTGAGTCTGGGCCTGGTGGCAGAAGGCGGGGGTGGTTTCGTGTCCACCTCCAGCCATAATGTGTCAGTCTGCTTTGAGAACTTCACCCAGGACCAGCTGGACCTGCTGCTGCCATTGCGCCTGGAGATGGCGCTCCTCCTCTTCCTAATGCCACTGGCCATTACCGCCTTCTGCACGCTGCGCTGCGTAGCCCTGGTGTGGCGGTCCTGCTTGCCCGTCCTGGGAAAGAGGCGCGTCCTGGCCGTGGCCCTTTCCACACTGGCTGTGTTTGTGGTTTGCTACGTGCCCTACAACGCCTCACACATCGTGGGCTTTGTGCTGCAGGAGAACGTCCACTGGAGGACTGAGGCCATGCTGTCCAGTGCATGTAACGTCTTCCTGGAGCCTGTGGTCATGCTGATGCTCTCCCCGGCAACGCCCCGCGGCCTCATGGGAAGGCTCTGTGGAAGGCCCAGCAGATACAGCCGGACAGAGGGGCGCCATTGTAGCAAAACCATCACACGGGACCCTCTAGCTAATATGGGGCAGGAGGACAATTTCAACTGA

Function

NR:

description
free fatty acid receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951038.1 True 963 mRNA 0.61 2 35016978 35018421

Neighbor

gene id symbol gene type direction distance location
LOC110496079 LOC106588239 coding downstream 821 35012010 ~ 35016157 (-)
LOC110496078 LOC106588238 coding downstream 17739 34997472 ~ 34999239 (-)
LOC110496076 LOC106588236 coding downstream 73087 34933039 ~ 34943891 (-)
zbtb22a LOC106588234 coding downstream 93022 34906715 ~ 34923956 (-)
sall3b LOC106588232 coding downstream 208478 34795394 ~ 34808500 (-)
ago3b i2c3 coding upstream 32974 35051395 ~ 35093817 (-)
LOC110496081 LOC106588241 coding upstream 132930 35151351 ~ 35203984 (-)
LOC110496085 NA coding upstream 329523 35346895 ~ 35351655 (-)
si:ch73-347e22.4 LOC106588244 coding upstream 359378 35377799 ~ 35392845 (-)
LOC110496091 LOC106588245 coding upstream 382305 35400726 ~ 35407830 (-)
G1542914 NA non-coding downstream 42223 34974476 ~ 34974755 (-)
G1542912 NA non-coding downstream 43883 34972215 ~ 34973095 (-)
G1542847 NA non-coding downstream 47460 34968643 ~ 34969518 (-)
G1542851 NA non-coding downstream 48430 34967990 ~ 34968548 (-)
G1542848 NA non-coding downstream 49101 34964360 ~ 34967877 (-)
G1542859 NA non-coding upstream 20787 35039208 ~ 35050281 (-)
G1542979 NA non-coding upstream 101556 35119977 ~ 35120250 (-)
G1542990 NA non-coding upstream 125403 35143824 ~ 35144167 (-)
G1542993 NA non-coding upstream 129220 35147641 ~ 35149555 (-)
G1542996 NA non-coding upstream 135891 35154312 ~ 35154536 (-)
atp9b atp9b other downstream 277339 34735374 ~ 34794929 (-)
G1541318 NA other downstream 854520 34161927 ~ 34162458 (-)
LOC110496049 LOC106588217 other downstream 1342747 33657641 ~ 33674304 (-)
LOC110496048 LOC106588215 other downstream 1406085 33602474 ~ 33610948 (-)
G1540473 LOC106581475 other downstream 1625226 33391339 ~ 33391752 (-)
G1542988 sast other upstream 119216 35137637 ~ 35138554 (-)
G1543128 LOC106588245 other upstream 434197 35452618 ~ 35504157 (-)
LOC118941140 NA other upstream 476901 35492995 ~ 35499681 (-)

Expression


Co-expression Network