olah (sast)


Basic Information

Item Value
gene id olah
gene name sast
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35131761 ~ 35139834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160595.1
aaaaagaaggaaaggaggagaagaacCAGGAAGCTTTGAAAAAAATGTGAGGTGCCACGACTATTTAACAGTAGAATGGACAAGGTGATCAACTGCTTCAGTAAGAGACCTGATGCCGTGGCCAGGCTGATATGCTTCCCATGGGCAGGTGGAGGCTCCATACACTATGCACGCTGGGGGAAAATCCTCACCTCCATTGaagTGTATGCTGTTAAACTTCCTGGCCGGGAGGCTCGAGCCAAAGAGCCCTTCTTTCAAAGCATGGAGCAGATTGTAGATGAGGTCATCAATGTGCTACTGCCGGTGCTCAAGGAGAAACCGTTTGCCCTCTTTGGCCACAGCTTTGGCGCCATGACCAGCTTTGCTATAGCAGATACTTTGAAAAGAGTCCACAAGTTGGAACCAATTCACATCTTCCTGTCTGGTGCCTCTGCACCCTACTCTGAGATGCGTATCCAAGCCCCAAAGAGAAGTGATTTATCAGACGAGGAGTTCCTCCAGTGGATGACCAGGATTGGTGGGACTCCCCCCGAGTTACTGGCCAATCCTGAGGTTGTAAAGCTCTTCCTACCTGCGCTGAAAGCCGACCTCCACGTGGTGGAGAACTACAGGTGTGACAGGCcagagagtcctctcctctcatgcCCAGTCACATGCTTCGATGGAAAGCAGGACATGCCTCATGACTTACAAGCATGGAAAGACATATCATCTGGAGATTTTACAGTGCAAATGCTACCTGGAGCTCACTTTTATTTAAAAGATGCAGCCAATGAGAAGATCATATTGGACTACATCACAAAGTATCTGGAGATGGCGGAAATGGACTACTTGTAGCTATGACGGGCACAGTGGCAGTAAAGGAAATGTATCATGTTATGTTTTCATTGTAGTAACACAACTAGTTTTACTTAGTCCAATAAGCATTTCAACAGTAGTATCTATGCCTTGGAGCAATAATGCAAATTAAGTAGGGAAGTAGGGTTTGTTGACCATGTGAATCTAGCCAATGCGTCTAAGATTTTACGAGTGATGTAAGATGTATTACAGCCTAAAATGGAATCCAGAGAGATTGCCTGACTAGTCctcaaatcaaataaatcaaattttattggtcac

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0016788 hydrolase activity, acting on ester bonds molecular_function

KEGG:

id description
K01071 MCH; medium-chain acyl-[acyl-carrier-protein] hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160595.1 True 1119 mRNA 0.46 7 35131761 35139834

Neighbor

gene id symbol gene type direction distance location
LOC110496075 LOC106588237 coding upstream 145573 34959423 ~ 34986188 (+)
LOC110496074 NA coding upstream 210010 34918537 ~ 34921751 (+)
mbpa LOC106588233 coding upstream 233348 34883492 ~ 34898413 (+)
LOC110496067 LOC106588229 coding upstream 491804 34633226 ~ 34640621 (+)
LOC110496068 slc52a2 coding upstream 498804 34627456 ~ 34632957 (+)
LOC110496082 LOC106588242 coding downstream 104363 35237754 ~ 35324664 (+)
tomm40l LOC106588243 coding downstream 195214 35335048 ~ 35348295 (+)
LOC118941149 NA coding downstream 272937 35412771 ~ 35433941 (+)
LOC118941148 NA coding downstream 301309 35441143 ~ 35504636 (+)
LOC110496101 LOC106588519 coding downstream 749732 35889566 ~ 35908363 (+)
G1541809 NA non-coding upstream 158838 34972194 ~ 34972923 (+)
G1541811 NA non-coding upstream 162166 34968646 ~ 34969595 (+)
G1541815 NA non-coding upstream 163422 34967990 ~ 34968339 (+)
G1541828 NA non-coding upstream 201574 34929979 ~ 34930187 (+)
G1541827 NA non-coding upstream 201918 34929523 ~ 34929843 (+)
G1541933 NA non-coding downstream 10844 35150678 ~ 35151223 (+)
G1541942 LOC106613263 non-coding downstream 23089 35162923 ~ 35163267 (+)
G1541943 NA non-coding downstream 23802 35163636 ~ 35163856 (+)
G1541944 NA non-coding downstream 26398 35166232 ~ 35166452 (+)
G1541946 NA non-coding downstream 32927 35172761 ~ 35173007 (+)
LOC110496058 LOC106588349 other upstream 1002102 34127192 ~ 34133734 (+)
G1540996 NA other upstream 1052687 34078718 ~ 34079074 (+)
LOC110496043 LOC106588212 other upstream 1594197 33535229 ~ 33537569 (+)
G1540551 NA other upstream 1640640 33489337 ~ 33491121 (+)
G1541989 NA other downstream 142769 35282603 ~ 35283706 (+)
G1542037 LOC106588244 other downstream 235410 35373871 ~ 35386463 (+)
G1542052 LOC106588245 other downstream 262003 35400723 ~ 35481348 (+)
G1542051 LOC106588245 other downstream 339001 35478835 ~ 35502933 (+)
G1542090 NA other downstream 389709 35529543 ~ 35606179 (+)

Expression


Co-expression Network