LOC110496097 (LOC105009768)


Basic Information

Item Value
gene id LOC110496097
gene name LOC105009768
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 35717955 ~ 35721190 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571789.2
CCATATGCCCTCTTCCCAGGAAGAACTGGTTTTAACAGTACCTTGAAAAAGGGGAGATAGCGTGGAGTGGTACAGTGTATATATAGCCTTGGTTGTGTGAGCGCCATACGTACAAACAAACATGAAAGCCCTGATTCTTCTGGCTTTGCTCGGAGCAGTGTTTGCTGCCCcggtggaggagagggatgagaaggTTGTCGGAGGGTATGAGTGCCCTGCCCACTCCGTGCCCTACCAAGTGTCTCTGAACGCTGGCTACCACTTCTGCGGTGGCTCCCTGATCTCCAGCCAGTGGGTGGTGTCTGCTGCCCACTGCCACAAGTCTCGTATCCAGGTGCGTCTGGGTGAGCACAACATCGAGCAGAACGAGGTCACTGAGCAGTGGATCGACTCCGCCAAGCTAATCAAGCACCCCAACTACGACAGTTACACCCTGGACAACGACATCATGCTGATCAAGCTGAGCAAGCCTGCCACCCTCAACAGCTACGTCCAGACTGTGGCCCTGCCCTCCCGCTGCCCCCAAGCCGACGAGAACTGCCTGGTGTCCGGCTGGGGCAACACCATCCCCAATGGAAACAGCTTTCCTACTAAACTCCAGTGCCTGAGGCAGCCCATCATCGATCACAGAATCTGCGAGAATGCTTACCCCCATCTGTTCACAGAGAACATGGTATGCTCCGGATTCATGCACGGGGGAGCCAGCAGCTGTCAGggGGATTCCGGTGGACCCCTGGTGTGTAATGGTCAGCTGCAGGGTGTGGTGTCCTGGGGTTACGAGTGTGCCCAGGAGGGACACCCCAGTGTCTATGCCCGCGTTTGCCAATACAACAACTGGATCAGCGATATCATGAGCAGCaactaaacacaaatacacagtgttgcacacacacacatgtactgtaATGCTCACACACTCATTCAAGGTCACACTAACTATGCCAATCAGAAACATTCACTCTACCTCTGAGTCAACAGCCAGTGTATCAGTCAATACGTTGGGATACTGTGCAGCACTCTCACACCCTGTCAGTAATATACCGTTTGGAACACACACTATATCCCGTGCAGACTACAGCCTACCCCCAGAGAAGTTTAGGTTATATCTATGAAATGAACTACAATAAATCATATCagtgtgtttttttcttcttcaaaa

Function

NR:

description
trypsin-3-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571789.2 True 1159 mRNA 0.52 6 35717955 35721190

Neighbor

gene id symbol gene type direction distance location
LOC118941150 NA coding downstream 38055 35519535 ~ 35679900 (-)
LOC110496088 NA coding downstream 210616 35500146 ~ 35507339 (-)
LOC118941140 NA coding downstream 218274 35492995 ~ 35499681 (-)
LOC118941141 NA coding downstream 229438 35485826 ~ 35488517 (-)
LOC118941139 NA coding downstream 234620 35478658 ~ 35483335 (-)
LOC110496098 LOC106588247 coding upstream 20162 35741352 ~ 35808050 (-)
LOC110496099 LOC106588248 coding upstream 87776 35808966 ~ 35816670 (-)
LOC110496100 LOC106588520 coding upstream 150495 35871685 ~ 35882464 (-)
LOC110496102 LOC106570058 coding upstream 190815 35912005 ~ 35918139 (-)
LOC110496103 LOC106588514 coding upstream 197103 35918293 ~ 35971717 (-)
G1543148 NA non-coding downstream 200019 35517139 ~ 35517936 (-)
G1543154 NA non-coding downstream 205970 35511472 ~ 35511985 (-)
G1543125 LOC106588245 non-coding downstream 215919 35478835 ~ 35502036 (-)
G1543265 NA non-coding upstream 30841 35752031 ~ 35752372 (-)
G1543285 NA non-coding upstream 121987 35843177 ~ 35843412 (-)
G1543288 NA non-coding upstream 139446 35860636 ~ 35860835 (-)
G1543291 NA non-coding upstream 148622 35869812 ~ 35870192 (-)
G1543297 NA non-coding upstream 164474 35885664 ~ 35885894 (-)
G1543128 LOC106588245 other downstream 213798 35452618 ~ 35504157 (-)
LOC110496085 NA other downstream 368293 35346895 ~ 35351655 (-)
LOC110496081 LOC106588241 other downstream 537927 35151351 ~ 35203984 (-)
G1542988 sast other downstream 579401 35137637 ~ 35138554 (-)
G1543346 LOC106588513 other upstream 289797 36010987 ~ 36012686 (-)
G1544806 NA other upstream 1580318 37301508 ~ 37302174 (-)
ppt1 LOC106588481 other upstream 2200965 37922153 ~ 37930745 (-)
LOC110496154 LOC106588291 other upstream 2426400 38121576 ~ 38152320 (-)
G1546053 NA other upstream 2444060 38165250 ~ 38214049 (-)

Expression


Co-expression Network