abrab (LOC106570048)


Basic Information

Item Value
gene id abrab
gene name LOC106570048
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 36464570 ~ 36465358 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951040.1
ATGGGTGAGGGTCAAAGACCCTCCAGCTCAGTGAGCAAAAAGGAGTTGGATGACGCCAACAAGATCAACGCTCTCTCAAAGAAGTACAGTGCCGTGGGCGATCTGAAGAGCCGCTGGCAGAACTGGTCCTCGACGAACACCGTCAACCAGAAGCTCAACCCCTTCAGTGAGGACTTTGACTATGAATACTCCATGTCCCTACGCCTCCACAAAGGCGAGGAGGGTTACGGACGCCCCAAGGAGGACACCAAAACAACAGCCGAACGTGCCAGGCGAGCCAAGCAACACATCCATGGTGAGATAGCCGACATGTGCTATGTGATCAAGACTATGAACGACCCAGATCCGGACGGGAAGACCCACGTCACTTTCAGAGAACTGTTTGATAGATACGTACGCGTCTCTGACAAGGTGGTGGGGATTCTTCTGAGAGTCAAGAGGCATGGGAAGGTGTCGTTCGAGGGGGAGATGCTGAGGCAAGGGCAGGATGATGGTGTTATCATCACCCTGTTGGTGTGA

Function

NR:

description
actin-binding Rho-activating protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951040.1 True 519 mRNA 0.54 4 36464570 36465358

Neighbor

gene id symbol gene type direction distance location
samd12 LOC106588503 coding downstream 3109 36336515 ~ 36461461 (-)
ext1b LOC103365060 coding downstream 156172 36196135 ~ 36308398 (-)
LOC110496110 LOC106588509 coding downstream 363653 36084134 ~ 36100917 (-)
LOC110496109 LOC106588511 coding downstream 387271 36068180 ~ 36077299 (-)
LOC110496104 LOC106588515 coding downstream 483622 35975293 ~ 35980948 (-)
angpt1 LOC106588502 coding upstream 33454 36498812 ~ 36560713 (-)
LOC110496117 LOC106612724 coding upstream 279020 36744378 ~ 36747323 (-)
sdc2 LOC106570046 coding upstream 293827 36759185 ~ 36793397 (-)
LOC110496119 ppp1r36 coding upstream 335158 36800516 ~ 36813545 (-)
LOC110496120 LOC106588498 coding upstream 358506 36823864 ~ 36835060 (-)
G1543639 NA non-coding downstream 94873 36367932 ~ 36369697 (-)
G1543605 NA non-coding downstream 148307 36315839 ~ 36316263 (-)
G1543428 NA non-coding downstream 270725 36192748 ~ 36193845 (-)
G1543390 NA non-coding downstream 360066 36104279 ~ 36104504 (-)
G1543727 NA non-coding upstream 11775 36477133 ~ 36477477 (-)
G1543739 NA non-coding upstream 20432 36485790 ~ 36486155 (-)
G1543850 NA non-coding upstream 97941 36563299 ~ 36563531 (-)
G1543853 NA non-coding upstream 99576 36564934 ~ 36565274 (-)
G1543855 NA non-coding upstream 100285 36565643 ~ 36566449 (-)
G1543346 LOC106588513 other downstream 451884 36010987 ~ 36012686 (-)
G1543128 LOC106588245 other downstream 960413 35452618 ~ 35504157 (-)
LOC118941140 NA other downstream 967588 35492995 ~ 35499681 (-)
LOC110496085 NA other downstream 1114908 35346895 ~ 35351655 (-)
LOC110496081 LOC106588241 other downstream 1284542 35151351 ~ 35203984 (-)
G1544806 NA other upstream 836150 37301508 ~ 37302174 (-)
ppt1 LOC106588481 other upstream 1456797 37922153 ~ 37930745 (-)
LOC110496154 LOC106588291 other upstream 1682232 38121576 ~ 38152320 (-)
G1546053 NA other upstream 1699892 38165250 ~ 38214049 (-)
LOC110496167 LOC106588455 other upstream 2094291 38557052 ~ 38563365 (-)

Expression


Co-expression Network