LOC110496119 (ppp1r36)


Basic Information

Item Value
gene id LOC110496119
gene name ppp1r36
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 36800516 ~ 36813545 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571823.2
TTTTAGATACTCTAGATACATTAGATACTCCATAATAATTGTTATGATGATTCTGAACTGTCTTGAAATGCATAGGCCACGTCATTGCAAACACCGGATTAGCCACACCAAGGTCCTGCATTGGATTCTGCGCTTCTCTCTTTTCAAGTGCTGCCACATAGACCCGATTGGCTGTTGCCTAGATACTAGACCTACATTTTTAGTAAACATATCGAGGGTAGCAGGGAGGAAGATGAGCTTTATGGTATAAAGGAGAAATGCCGAAACCACAAAAGGAAACGATCAGCATACCTCCACCTGGGCGATGGAACTGGAATGATGAAACCCAAGCCCTCGAGTTCACCAGTTTTAGTACATCTGTGGAGGtaaaagaaaagagaaaaaagACTAAACCTGTCAATTTTCAAGATCTTGCCAGCAAGCGTCCAGAGAGGCAAACGCAGTCATCGGCCAAGAGGGGGGGACAAAGCAGCAGGAAGACTGTGGGTCCTGCTCAACTCAATGCCTACAAGTCCTCAGTAAAACGGGGTCAGAGGGACTATGTGACCATCGAGGATGTGAAACAGGTGGCACTCAGTTTGCTGCAGGAGAATGATGCACTCCCCATTCCATTTTGCTTCCTGTCTGTGTTGAAgAGCAAAGAGCTGGATGAGTTCCTGGCTGCCCTCCTGCTCTACCTGTCCTGTTACTTTGAGAGGAAGTCTCTGGAGAAGAAGCCCAAGCCTCTCATGGCTGAGCAGAGTATCACAGAGAAGCAGGTGATGGCGGAGACCCTTGCTAAGGTGGAGCTGGCCCAGAAGCAGCTGGCCTTCTGCTACTCCAGCCTGGTCCTGGGCCTGGGCCTATCCCAGCAGCACCACATGGCCTGTGGCAGGAGCCGTGTGTCATTGACCTACAAAGACAGGCAGTTGTATGAGTGTCTGTACAGCTTCTTCTGCTACGTGGCGTGGGTGACGTTCAGTAGGAAGGACCTGAGAGGCATCCAGGAGGAGGTGGGGCGCCTGCTGCGTTCTGACACCTTCAACCCCGCCCTCAGGACCAGGATAGATGCCACAGAGGACAACCTGGCCCAGGACTCCTCCACCAAAGAGGGACAGACTGAGCCCAAAGTGCACACACAGAGCCACAATGCCCCAGAGCAAAGGaagtcccagcgtcgtccggccTTGAGTAAGATGGTGACCCAGCGCTCCCCGGTCATGGTGTCCCTGCTGCCATATCCGCGGGAGGAGGCTCCTCATCTGTTCTGCCGCTACAGACCCAGGAAGCAGAGCCAGGCCAAGCTGTGTAACCCAGAGACCCTGATGGAGGAGCTCAAAGAGCAGCTGGCCTCTGTCAGCTTTGGGATTCTGGGGAAGCCTCTGAGCCAGTTCAGCTGCACCACCCTTATGCCCCAGGGAGCTAACAATGAAgacgacgaggaggaggaggaagatgacgaGGAGGATGACGATGATGAAGACTCCGGCGTCCATGTTCGAAGCAGTAAGAACACCTTCATGGCTCAGAGACCTGTCGCATCAGCAGTGGACCAACGCGGCAGCCTCAGCCGCGCCAATACAGTCATCTCACGGGCCACCACAGAGGGAGTGTCCTCAGACACAGAGTGAGAGTATGTGCGCGTCCCCCaaaatttgacaaataaaaaaataaaaaataacatacaATTATGTACCGTAGCATTGAATTTAATAGCAAGGTAAGCTAGCAATCATTTTGCCTCCCTTGATaatgtttaaataaaaaaataaccaatcagcattgagctaaactgagtgagctcaattgtgaatggtcctggtgcaccaaaaaaagtgtcaatgGAAGCTAGTTTGGATGTgacttcacaccaatcacattgCATCAAAAGTATTGACGAAAAAAGGTGCATTTTTGCATCTCGTTGCgtcgttgtcctccggtggctagctaaaATCGACCCTTTTATAAACGAGCTTGGATGGAGAAAAGGAAAAATTGGATGGAGAtaaggatttggacttgtggaCTTACTGTACCGATCAGTGATTATAACGGTGATTcagatccaaccataaattcatacattgtgcccctggcctgagagggtggaagttcaatatgtagctagatgtagtaggctaacgttaactagctgacTCATCATTGCCTTTGAAATTAAGTTAGGCTAGCTGGCAAGCCTTTTAGCCATGTAGCCTAATCGAGGACAACAACAACTAaaagtgtgtaggctactgtatgacAGAGAAGAGGATTGCATTGGCGTTCCTCTACAAGTAAGGTAAATCATTATGTTTTTCTACttgcgcacacacaccacacacaatcaggaccatggacagccacatgttATTTACcttatgttgattggactaaattgtttttggtccTGATCTTTAAGTTGCTACTCTGTTAGACTAAGCATTGGTGATTTGATGATTTGGAAGTTGAAATGATGGTGGATTTACTTTAGCAGAGGCctctcctgtttttttttttgccactTGTGATAACTCTGTGGTTCTCAATCAATAATTGTTTAGTAGTCAGATATTTTGCAAGCAAAACATAACGTTTTAAATTTCATTTCCTGCAGTTGTACAAATTTGACCATGGGGCGTagaatttttaaaacatttttaaagcaagtttgctccaattatacacattttgccatgggccaAAGAGAAGATTTACCAATTTCAAGCAATTCTTTACATTTTCCCATGGGGTGTAGAGAAGATTTTGCAGTTTTACAtcacattttctgcaattctacacattttgccataggttGGAGAgtaatgtttgcagtttttaatatttaatatttttttgtgaGAGTGACTAATTAAATCAATGGGGGGCCCCCAGttggtaattcgaccatgattactacaagtttagaaaTCTGGACATTAGACTAacaaaaaatgttagctgacatggacttattgagtgactgtcagtgactgacataacaagagaaaaactgctgaggCACAACTACAttttcaaaatggcaccctgtatattctactattctaacctCAATTGAGATCttaatgatttatttttattgatcCACAGgccaccagttgcccatccctgctgtaGGTCATCTACCTGTTTGtgacatgcaatatgctttgttgACTTCACCAGACAAATATggctctctggttttgtgatgaaacaaatgtgtggttgaatttattctgcccagtggtgtaaagtactttagtcAAATTACTTTAATGTACTACTTAGTTGTTTATTGGTGTATCTGTACTGCactttaccatttatatttttgacaacttttactttactacattcctaaagaaaataatgtacgttTTACTCCATGTATTTTCtctgacacacaaaagtactcgttacattttgaatgtttaacaggacaggaaaattgtccaattcacacacttatcaagagagcaACCCTGCTcacccctactgtctctgatctggcagacttagTTTGTacattatgtctgagtgttgga
>TU1767144
gctaacgttaactagctgacTCATCATTGCCTTTGAAATTAAGTTAGGCTAGCTGGCAAGCCTTTTAGCCATGTAGCCTAATCGAGGACAACAACAACTAaaagtgtgtaggctactgtatgacAGAGAAGAGGATTGCATTGGCGTTCCTCTACAAGTAAGGTAAATCATTATGTTTTTCTACttgcgcacacacaccacacacaatcaggaccatggacagccacatgttATTTACcttatgttgattggactaaattgtttttggtccTGATCTTTAAGTTGCTACTCTGTTAGACTAAGCATTGGTGATTTGATGATTTGGAAGTTGAAATGATGGTGGATTTACTTTAGCAGAGGCctctcctgtttttttgtttgctccaattatacacattttgccatgggccaAAGAGAAGATTTACCAATTTCAAGCAATTCTTTACATTTTCCCATGGGGTGTAGAGAAGATTTTGCAGTTTTACAtcacattttctgcaattctacacattttgccataggttGGAGAgtaatgtttgcagtttttaatatttaatatttttttgtgaGAGTGACTAATTAAATCAATGGGGGGCCCCCAGttggtaattcgaccatgattactacaagtttagaaaTCTGGACATTAGACTAacaaaaaatgttagctgacatggacttattgagtgactgtcagtgactgacataacaagagaaaaactgctgaggCACAACTACAttttcaaaatggcaccctgtatattctactattctaacctCAATTGAGATCttaatgatttatttttattgatcCACAGgccaccagttgcccatccctgctgtaGGTCATCTACCTGTTTGtgacatgcaatatgctttgttgACTTCACCAGACAAATATggctctctggttttgtgatgaaacaaatgtgtggttgaatttattctgcccagtggtgtaaagtactttagtcAAATTACTTTAATGTACTACTTAGTTGTTTATTGGTGTATCTGTACTGCactttaccatttatatttttgacaacttttactttactacattcctaaagaaaataatgtacgttTTACTCCATGTATTTTCtctgacacacaaaagtactcgttacattttgaatgtttaacaggacaggaaaattgtccaattcacacacttatcaagagagcaACCCTGCTcacccctactgtctc

Function

symbol description
ppp1r36 Predicted to enable phosphatase binding activity and protein phosphatase inhibitor activity. Predicted to be involved in negative regulation of phosphatase activity.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571823.2 False 3527 mRNA 0.44 11 36800516 36813545
TU1767144 True 1212 lncRNA 0.37 2 36800559 36801923

Neighbor

gene id symbol gene type direction distance location
sdc2 LOC106570046 coding downstream 7119 36759185 ~ 36793397 (-)
LOC110496117 LOC106612724 coding downstream 53193 36744378 ~ 36747323 (-)
angpt1 LOC106588502 coding downstream 239803 36498812 ~ 36560713 (-)
abrab LOC106570048 coding downstream 335158 36464570 ~ 36465358 (-)
samd12 LOC106588503 coding downstream 339055 36336515 ~ 36461461 (-)
LOC110496120 LOC106588498 coding upstream 10319 36823864 ~ 36835060 (-)
zgc:114119 LOC106588497 coding upstream 117755 36931300 ~ 36939648 (-)
zgc:101785 LOC106588494 coding upstream 161451 36974996 ~ 36989677 (-)
LOC110496124 LOC106588493 coding upstream 176696 36990241 ~ 37056749 (-)
prdm1b LOC106588492 coding upstream 263482 37077027 ~ 37090104 (-)
G1544260 NA non-coding downstream 9364 36790899 ~ 36791152 (-)
G1544258 NA non-coding downstream 12436 36787856 ~ 36788080 (-)
G1544253 NA non-coding downstream 17525 36782778 ~ 36782991 (-)
G1544252 NA non-coding downstream 18072 36782112 ~ 36782444 (-)
G1544246 NA non-coding downstream 33699 36766510 ~ 36766817 (-)
G1544291 NA non-coding upstream 32855 36846400 ~ 36846628 (-)
G1544292 NA non-coding upstream 34652 36848197 ~ 36848424 (-)
G1544302 NA non-coding upstream 43302 36856847 ~ 36857354 (-)
G1544304 NA non-coding upstream 45026 36858571 ~ 36858812 (-)
G1544308 NA non-coding upstream 48767 36862312 ~ 36862846 (-)
G1543346 LOC106588513 other downstream 787830 36010987 ~ 36012686 (-)
G1543128 LOC106588245 other downstream 1296359 35452618 ~ 35504157 (-)
LOC118941140 NA other downstream 1303534 35492995 ~ 35499681 (-)
LOC110496085 NA other downstream 1450854 35346895 ~ 35351655 (-)
LOC110496081 LOC106588241 other downstream 1620488 35151351 ~ 35203984 (-)
G1544806 NA other upstream 487963 37301508 ~ 37302174 (-)
ppt1 LOC106588481 other upstream 1108610 37922153 ~ 37930745 (-)
LOC110496154 LOC106588291 other upstream 1334045 38121576 ~ 38152320 (-)
G1546053 NA other upstream 1351705 38165250 ~ 38214049 (-)
LOC110496167 LOC106588455 other upstream 1746104 38557052 ~ 38563365 (-)
G1544269 NA non-coding upstream 9007 36810930 ~ 36811204 (-)
G1544271 NA non-coding upstream 9803 36811726 ~ 36812025 (-)

Expression


Co-expression Network