trnaa-ugc-136


Basic Information

Item Value
gene id trnaa-ugc-136
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 36936458 ~ 36936527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-136
gtgtggctcagttggtagagcatggcacttgcaatgccatggttgtgggtttgattcccacgggggacca

Function

NR:

description
cholesteryl ester transfer protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-136 True 70 mRNA 0.56 1 36936458 36936527

Neighbor

gene id symbol gene type direction distance location
ext1c LOC106588496 coding upstream 4720 36855128 ~ 36932244 (+)
med30 LOC106570051 coding upstream 742608 36135094 ~ 36197363 (+)
LOC110496805 LOC106588507 coding upstream 778067 36147703 ~ 36158391 (+)
LOC110496111 LOC106588509 coding upstream 851692 36076661 ~ 36091606 (+)
LOC110496108 LOC106588512 coding upstream 868351 36023893 ~ 36068107 (+)
LOC110496123 NA coding downstream 29852 36966379 ~ 36967984 (+)
LOC110496127 NA coding downstream 79233 37015760 ~ 37022862 (+)
LOC110496809 LOC106588491 coding downstream 196062 37132589 ~ 37141720 (+)
LOC110496810 LOC106588469 coding downstream 529264 37465791 ~ 37720841 (+)
LOC110496133 LOC106588468 coding downstream 859922 37796449 ~ 37814338 (+)
G1544142 NA non-coding upstream 61767 36874479 ~ 36874691 (+)
G1544139 NA non-coding upstream 68342 36867899 ~ 36868116 (+)
G1544135 NA non-coding upstream 74914 36861339 ~ 36861544 (+)
G1544129 NA non-coding upstream 86757 36849463 ~ 36849701 (+)
G1544370 NA non-coding downstream 8229 36944756 ~ 36945009 (+)
G1544377 NA non-coding downstream 13105 36949632 ~ 36949845 (+)
G1544379 NA non-coding downstream 13496 36950023 ~ 36950579 (+)
G1544402 NA non-coding downstream 28473 36965000 ~ 36965299 (+)
G1544404 NA non-coding downstream 28957 36965484 ~ 36965684 (+)
G1544137 NA other upstream 73275 36862923 ~ 36863183 (+)
G1544007 NA other upstream 171225 36764294 ~ 36765233 (+)
G1542324 LOC106588514 other upstream 972753 35961201 ~ 35963705 (+)
G1542282 NA other upstream 1065900 35870237 ~ 35870558 (+)
G1544455 NA other downstream 119456 37055983 ~ 37056487 (+)
LOC110496158 LOC106588463 other downstream 1256725 38193174 ~ 38204538 (+)
G1545533 LOC104965079 other downstream 1738500 38675027 ~ 38676004 (+)
LOC110496176 LOC106588451 other downstream 1753911 38677975 ~ 38696088 (+)
G1546605 LOC106588434 other downstream 2179961 39116488 ~ 39120019 (+)

Expression


Co-expression Network